Oreochromis niloticus (Nile tilapia): 100708332
Help
Entry
100708332 CDS
T06104
Symbol
brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03440
Homologous recombination
onl03460
Fanconi anemia pathway
onl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100708332 (brca1)
09124 Replication and repair
03440 Homologous recombination
100708332 (brca1)
03460 Fanconi anemia pathway
100708332 (brca1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
onl01009
]
100708332 (brca1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100708332 (brca1)
03036 Chromosome and associated proteins [BR:
onl03036
]
100708332 (brca1)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100708332 (brca1)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100708332 (brca1)
Protein phosphatases and associated proteins [BR:
onl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100708332 (brca1)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100708332 (brca1)
Multi subunit type E3
BRCC complex
100708332 (brca1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100708332 (brca1)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100708332 (brca1)
BRCA1-A complex
100708332 (brca1)
BRCA1-B complex
100708332 (brca1)
BRCA1-C complex
100708332 (brca1)
BRCA complex
100708332 (brca1)
FA (Fanconi anemia) pathway
Downstream FA components
100708332 (brca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-ANAPC11
zf-MIZ
zf-RING_4
zf-RING_10
PTCB-BRCT
YicC-like_C
ANAPC16
TRAF3_RING
zf-rbx1
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
100708332
NCBI-ProteinID:
XP_005471333
Ensembl:
ENSONIG00000016326
UniProt:
I3KHG1
LinkDB
All DBs
Position
LG8:complement(14112058..14137103)
Genome browser
AA seq
1392 aa
AA seq
DB search
MKTPTASDVKKGISALWETLQCPICLDLMTAPVSTKCDHQFCKFCMMKLLDKSKQNKANC
PVCKSTVTKRSLQESPGFQKLVAGLQDMIQAYEHDTGTNYFTGTSQQGRYAGVTGAETTK
GTLTSGDACGTDIDNVQNADCSDLPESHSSTIAARNGFARLMGLDDSAPLTTENEALDSG
LGDAPLTSDKKMSSPTDNREPVQAEMSDVVENTSKTRKNRGKRSRENASLYSSFIPDENE
DQPLRKSSRKKQKKDVEPDKILDHKRKKSLEKVAEWLMKVPAEGSLELEKPDENSDGSDS
CSSASTIDIRQCNSELNPKKEDRAKALEEQVFGAVYRRRVNRNISPLLKVFTEPSIAEEI
LTCEDASSVREENSFASFVKTNESNVEDEQQMTEEINDGSGICKSAEQMEIGTEIDTGMH
VDELNNFAESHQNKGGDDVSSVVADNVEQQLGRKTRKRTCNVLQQVDSDLKEQARAKSEG
GEQKKTDKRKGKNTRSVKGKPSRVAKPLVLVGVQNGETSPVIRARAEEVQVQIENYPSSE
DQVTPVIKSSRRSRRLQLFAEEVQEGHKQASEKAKATERNSSMAKQPEHANGEALDDVNK
VAKSAKRNGCVYNEDIGEIENMESAERTSNLRPREAVKELNAASGSAQLDDAAVVGPTLE
SDNQNSIQSQASVYKTKCIETENEEDRNDSELDTEQLLKSFKATKRKSFYLGSPDVKSSP
GSDKDAIKEPEKKHEGCSGVETAEKALGDSGKSSYDFISPSNSPVQPSITVSEKPDPAAV
EASISEQNCSGRFRSSPSSGLSPNKESKRDAESPPLSVVPQVVDSGLRFTAVEREELKDA
SQNTESRADCEDVRGIEHDAPATLKCSSVNTAEHRAVPESSLTPDDLIASPVQTIHKAEI
NSNDSGEVSINSSINRKPRTKRKAQRLEPSSESDSSGSKEELPTLTQIFGTSARPSARNQ
NQSDSGEDDRCEGTADAADRLPPACPSPDCVDSSQASVDLFGTPEESGDVPVNDTSVTME
SSQFSSEVLVTQQKIEMQKELVRLEKLMALVSEVLQEKESSPSKEIPPQTHQSTRDMGPD
AHRQLPRDQDAGHAADRKDVPEAGPYLNPEPSDSKGVPEPNPSEPVGDTQMAAEKSAHKG
VGVKGTGVSKTPSSTSAAKTQKDSSSLSDGQEDKENNSPPKDACRAKLVLVSSGLGPNEQ
IMVKKFAKRVGARVVSQVTPEVTHVIMRTDEQLVCERTLKYFLGIAGRKWVLSFQWISEC
FKQKKVLDESPFEVRGDVVNGPNHQGPSRARTTEDSNLLMKGFSICFQGPFTDMTTDDME
WMVELCGAAVVKDPLLLDGKQKSRQLVIVQPKPESSSSTYSSLSKQATVVTRGWLLDTVA
TYTLQNYSNYRT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaacagcctcagatgtcaagaaagggatttcagcgctttgggagactctg
cagtgtcccatttgcttggatttaatgactgctccggtatctactaagtgtgaccatcaa
ttctgcaaattttgcatgatgaaacttttggacaaatccaaacaaaacaaagccaactgt
cccgtgtgtaaaagcacagtcaccaaaaggagcttacaggagagccccgggtttcagaaa
cttgtagctggtttgcaggacatgatccaagcatatgagcatgacaccggcacaaactac
ttcactggaacatcccagcaagggcgatatgcaggtgtcacaggtgcagaaactactaaa
ggaactctgacatctggagatgcgtgtggcactgacattgacaatgtacaaaatgcagac
tgtagtgatcttccagaatcccactcctcaaccattgcagcccggaatggatttgcaaga
ctcatggggcttgacgattctgctcctttgacgacagaaaatgaagctctggatagcggg
ctcggtgatgctccactaacttctgacaagaaaatgtccagccccacagacaacagggaa
ccagtgcaagctgaaatgtcagacgttgtggagaatacttcaaaaacgcgtaagaataga
ggcaaaaggagccgggagaatgcctccctttattcgtcattcattccagatgaaaacgaa
gaccaacccctaagaaagtcctcgaggaagaagcagaaaaaagatgtggagcccgacaag
atccttgaccataaacgtaagaaaagtttagagaaagttgcagagtggctcatgaaagtt
ccagctgaaggaagtcttgagttagaaaaaccagacgaaaactctgatggctctgacagc
tgttcctccgcttcgacaatagatatcaggcaatgcaacagtgagctgaatccaaagaaa
gaagatcgggccaaagccctcgaagagcaggtgtttggggctgtctacagacgaagggtg
aacaggaacatctctcctctgcttaaggtttttacagagccatcaatagctgaagaaata
ttgacctgtgaagatgcttccagtgttagagaggaaaacagttttgcttcttttgtaaaa
acaaacgaaagtaacgtggaggatgagcagcaaatgacagaagaaataaatgacggcagt
gggatttgtaaatcagcagaacagatggagatcgggacagaaattgatacgggcatgcat
gtggacgagttaaacaactttgcagaaagtcaccaaaacaaaggtggagatgacgtttcc
agtgttgtggctgataatgtagaacaacaactggggaggaagacgaggaaaaggacgtgc
aacgttctgcaacaggtagacagcgacttaaaagagcaagctcgggcaaaatcagagggt
ggtgagcaaaagaaaactgacaaaaggaaaggtaaaaacacaagatctgtaaaaggcaag
ccctccagagtggcgaaaccccttgtcctggttggagttcaaaatggagaaaccagccct
gttattagagcgagagcagaagaagttcaggttcaaattgagaattaccctagcagcgag
gaccaagtaactcctgtcattaagagcagtaggagaagcagaagacttcagctgtttgct
gaggaagtccaggagggacacaagcaagcgagcgagaaagcgaaggcaactgaaagaaac
agcagcatggcaaagcagccggaacatgctaatggcgaagcgcttgatgatgtaaataag
gtggcaaagtcagctaaaagaaatggatgtgtttataatgaagacataggagagattgaa
aacatggagtctgctgagagaacatcaaatctgaggccaagagaagctgttaaagagtta
aatgctgcctcaggctctgctcagctagatgatgcagctgtggtagggccaacgcttgaa
agtgacaatcaaaacagtattcagtcacaggcctcggtttacaaaactaaatgtatcgaa
acagaaaacgaggaggacaggaacgacagtgagctcgacacggagcaacttctcaagagc
ttcaaagcaactaaaaggaaatctttctatcttggaagtccagacgtgaaaagcagcccc
ggttcagacaaagacgccatcaaagaaccagagaagaagcatgaaggttgttctggtgtt
gaaactgcagaaaaggctttaggagactccggcaagtcctcttatgatttcatctctcct
tccaactcaccggtccagccgagtataactgtttctgagaaaccggatccggcagcagtg
gaagcctcgatctctgaacaaaactgttcaggtcgcttcaggagtagtcctagcagtgga
ctgagtcctaacaaagagtcaaaacgtgatgcagaaagtcctcctctttctgtggtccct
caggtcgtagattctggtctccgcttcacagccgttgaacgtgaggagctaaaggatgcc
tctcaaaacacagagagtcgggctgactgtgaggatgtgagggggatagaacatgacgca
cctgccactttaaagtgttcctcagtcaacacagctgaacatagggcagttccagagtct
tctttgacccctgatgaccttatagcttcaccggtccaaactatccacaaagcagagatt
aacagcaacgacagtggagaggtcagcatcaactcctccatcaataggaagccgaggacg
aagagaaaggctcagagactggagccttcatccgagtccgatagcagtggatccaaagaa
gaattacccactctgacacaaatctttggaacatcagctcgtccctctgctcggaatcag
aatcagagcgactccggtgaagacgacagatgtgagggaacagctgatgcagcagatcgg
ttaccacctgcatgccccagccccgactgcgttgattccagtcaagcatctgtggacttg
ttcggcacgccagaagaatcaggtgacgttccggtaaatgacaccagtgttaccatggag
tcgtcacagttttcaagcgaagtccttgttacacagcaaaagatagaaatgcagaaggag
ctggtgaggctggagaagctgatggccctggtctcagaggtgcttcaggagaaagagagc
agtccttccaaagaaatccccccacaaacccatcagagcaccagagacatgggcccagac
gctcacagacagcttcctcgtgaccaggacgcagggcacgctgcagacaggaaagatgtt
ccagaagcgggaccgtacctaaacccagaaccatctgattccaaaggtgttcccgaaccc
aacccgtcagagcctgtaggtgatacacagatggcagcggagaagtctgcgcataaaggg
gtcggtgtcaaaggcactggagtctccaaaacaccttcttcaacttcagcagctaagact
cagaaggacagcagttcactgtccgacgggcaagaagacaaagaaaataacagccctcca
aaagacgcatgcagagctaagctggtgcttgtgtcatccggattgggcccaaatgagcag
attatggtgaaaaagtttgccaagagagttggtgcccgtgtggtttcccaggtaacacca
gaagtgactcatgtcattatgcgtacagatgaacagctggtatgtgagcgcacactgaaa
tacttcctgggaattgcaggcaggaagtgggtgttgagtttccagtggatttctgagtgc
ttcaaacaaaagaaagtcttagatgagagtccgtttgaggtgagaggggatgtggtgaac
gggcccaaccaccagggcccctcaagagctcggaccactgaagacagtaatctgctcatg
aagggcttcagcatctgcttccaggggccttttacagacatgactacagatgacatggag
tggatggtggagctctgtggagctgctgtagtgaaagatccacttctactcgatggtaaa
cagaagtcccggcagctcgtcattgtacagcctaaaccagagtcatcatcttcaacttac
agcagtctttccaaacaagctactgttgtaacccgtggttggttgttggatacagttgca
acctacacccttcaaaattacagcaactacagaacataa
DBGET
integrated database retrieval system
