KEGG   Oreochromis niloticus (Nile tilapia): 100708409
Entry
100708409         CDS       T06104                                 
Symbol
pole4
Name
(RefSeq) DNA polymerase epsilon subunit 4
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl03030  DNA replication
onl03410  Base excision repair
onl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:onl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100708409 (pole4)
   03410 Base excision repair
    100708409 (pole4)
   03420 Nucleotide excision repair
    100708409 (pole4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:onl03032]
    100708409 (pole4)
   03400 DNA repair and recombination proteins [BR:onl03400]
    100708409 (pole4)
Enzymes [BR:onl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100708409 (pole4)
DNA replication proteins [BR:onl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100708409 (pole4)
DNA repair and recombination proteins [BR:onl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100708409 (pole4)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C TAF TFIID-31kDa
Other DBs
NCBI-GeneID: 100708409
NCBI-ProteinID: XP_003439700
Ensembl: ENSONIG00000002352
UniProt: I3J252
LinkDB
Position
LG23:41697053..41700364
AA seq 128 aa
MAATVTTSLVTATEHDPDRCESEEETRGAEAEDSGQQQTGPVTVSHSRLSKLPLARIKAL
MKTDPDVSLASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDLDNAIEAIDEF
AFLEGTLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcagcaacagtgacgacgagtcttgtgaccgcaacggagcacgaccctgaccggtgt
gagagtgaggaggagacccgcggggccgaggcggaggacagcggccagcagcagacgggc
ccagtcacggtgagccacagccggctgtccaaactcccgctggcccgcatcaaggctctg
atgaagaccgacccagacgtgtccctcgccagccaggagtctgtgttcatcatcgctaaa
gccacggagttgtttgttgagatgattgccaaagatgctctagtgtatgcacagcaaggg
aagaggaaaactttgcaaagaaaagacttggacaatgcaatagaagccatagatgagttt
gcatttctcgaaggcacactggattaa

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