Oreochromis niloticus (Nile tilapia): 100709445
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Entry
100709445 CDS
T06104
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
onl04672
Intestinal immune network for IgA production
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100709445
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100709445
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100709445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
100709445
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
100709445
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Chemokines
100709445
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Chemokines
100709445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
100709445
NCBI-ProteinID:
XP_003450047
Ensembl:
ENSONIG00000043161
UniProt:
A0A669D2I6
LinkDB
All DBs
Position
LG6:30484944..30498409
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AA seq
102 aa
AA seq
DB search
MDVKLMALLALLAVATHVPTSNAKPISLVERCWCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKSNREVCINPETKWLQQYLKNAINKVKKSRRRANKIN
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaaactgatggcactgctggctctgttggccgtggccacacatgttccgacc
tccaacgcaaagcccatcagtctggttgagcgctgctggtgtcgatccactctcaacacg
gttccccagcgctccatcaaagagctcaagtttctccacacgcccaactgccccttccaa
gtcattgcaaagctgaagagcaacagggaagtttgcatcaaccctgagaccaaatggctg
cagcagtacttaaagaatgccattaacaaggtgaagaaatctagaagacgcgctaacaag
atcaactaa
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