Oreochromis niloticus (Nile tilapia): 100709470
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Entry
100709470 CDS
T06104
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
onl04510
Focal adhesion
onl04518
Integrin signaling
onl04519
Cadherin signaling
onl04540
Gap junction
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100709470
04020 Calcium signaling pathway
100709470
09133 Signaling molecules and interaction
04518 Integrin signaling
100709470
04519 Cadherin signaling
100709470
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100709470
04540 Gap junction
100709470
09142 Cell motility
04810 Regulation of actin cytoskeleton
100709470
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
onl01001
]
100709470
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
onl04090
]
100709470
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100709470
Protein kinases [BR:
onl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
100709470
CD molecules [BR:
onl04090
]
Proteins
100709470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Ig_MYOM1
C2-set_2
RIFIN
APH
Stevor
Orf78
Motif
Other DBs
NCBI-GeneID:
100709470
NCBI-ProteinID:
XP_003457026
Ensembl:
ENSONIG00000017780
UniProt:
I3KMR9
LinkDB
All DBs
Position
LG10:complement(33787354..33841199)
Genome browser
AA seq
1025 aa
AA seq
DB search
MMASIRGTGNISLLRFLLGVFLVHPEGAVSLELLPSASEVLVPSNSNYTVECLGWSEVKW
HFPQEPPVDGVLVDNRGSRSILQLFNITWRNSGRYTCEEASSDQSRNVDVFIPGQGPDEW
FVPMDLGVVMKEGEEGTIPCMVSNPKLNVSLYERPSRTLVSGMTYKPGRGFTGHLNDTSY
VCVATNGAQERESQTYYVFSIIVPKVMEVDLTVSSSVLKQGEVLTVNCTVKDTEMVFFSW
GFPRRQEIEPLTDFLPNQIRSFVNITAVTVADSGVYSCTVQETTQGQTVMKNITITVLDR
GYVYLWPSGETNVSSLLHHTLELSVEIDAHPAPTVIWTRQNQSVATETTTINTTHLSDSR
YVSTLTLVRVQMDQTGSYTATISNDDDIREATFNLEVQDPPRITSLSEVRSNAVLCVSEG
APPPSVTWYTCSSSHRCNLLNGKWRSQSKDSEGTTLQENITMVAERGITQVHSMLTLQTL
SSLSAVRCEATNSAGRRGKDLRVLSSSLLSQVVVLAVVLVLVIIAVIFLIILIILWRKKP
HYEVRWKVIESVSPDGQQYTYLDPTQLPYSPTWEIDRDHVNLGQVLGSGAFGRVVEATIS
GLINSHSTKAAVKMVKPRSDAVQSLMSELKVLVHLGPHLNIVNLLGACTRGGPVYLITEF
CCHGDLVNYLQRNKHAFLQGDTQTKSDSDGGYMDMNKEESAQYVAMKELSYADIEPAVYE
TPYTPTDQQEASTLLLSDSPLLSLNDLISFSYQIAQAMDFLSSRKCVHRDLAARNVLVCE
GKLVKVCDFGLARDLLKDQDYIARGNSFLPLKWMSPESIFQNIYSSQSDVWSYGVLLWEI
FSLGCSPYPDLPMTQEFYSALKRGYRMSRPDHSPQDMYDLMKRCWEEKPQSRPSFSSLLI
DMGNMLTDDYKQRYLQIAEDFLKGGNPAVHRYKQSLSRGAAEQEDAHASATPQVNRPEAE
PVEAGPSHVAYILPVTEITIESSAGAALDTVSPSMSDSPAISYSPEVTSSEDRQEAVGPE
EESCL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtccatcaggggaacaggaaatatcagcctgttgcggttcctcttgggtgtg
ttcctggttcatcctgaaggggcggtgtctctggagctgctgccatcagcctctgaagtt
ctggtcccctccaactccaattacacagtggagtgtttggggtggagtgaggtcaagtgg
cattttcctcaggaaccaccagtagacggggtcctcgtggacaatcgaggctccaggagc
atcctgcagctctttaacatcacatggaggaattctgggagatacacctgtgaggaggca
tcatctgatcagagcagaaatgttgatgtctttatacctggacaaggtcccgatgaatgg
tttgtcccaatggatctgggtgtggtgatgaaggagggagaggaaggcaccattccctgc
atggtgtccaacccgaagctcaatgtctcgctgtacgagcgccccagcaggacgctggtc
agtgggatgacatataagccagggcgtggcttcacgggtcacctcaatgacacatcatac
gtgtgcgtcgccacgaacggagctcaggagagggagtcgcaaacgtactacgtcttcagc
atcatagtcccaaaggtcatggaggtggacctgacggtgtccagcagtgtgctgaagcag
ggcgaggtcctcacggtaaactgcacggttaaagacacagagatggtcttcttctcctgg
ggcttcccccgcagacaggaaattgagccgctgacggacttcctgcccaatcagatccgc
tcctttgttaacatcactgcagtaacagtggcagattcaggtgtttatagctgcacagtg
caggagacgacacagggacaaactgtgatgaaaaatatcacaataacagtgctggacaga
ggttacgtttacctgtggccctcaggtgagaccaatgtgtcgtctctcctccatcacacg
ctggaattaagtgtagagattgacgcccaccccgcccccactgtcatctggacgagacag
aaccaatctgttgccacagaaaccaccactatcaacaccacacacctgtcagacagccgg
tatgtgagcacactgacgctggtgcgcgtgcagatggatcagacaggaagttacaccgca
actatttccaatgatgatgacatcagagaggctaccttcaacctggaggtacaagatcca
cccaggatcacatccctgtcagaggtcaggagtaacgctgtgctgtgtgtgagtgaggga
gctccacccccctctgttacctggtacacctgttccagctcacacagatgcaatcttttg
aatggcaagtggaggagccaatcaaaagactcagagggcacgacgctacaggagaacatt
actatggtggcagagagaggcatcacccaggtacacagcatgctgaccctccagactctc
agctctctgtcggccgtgcgctgtgaagccacaaactcagcgggcagacgagggaaggac
ctgcgagtcctctccagctctctcctgtctcaggtggtggtcttagcagtagtcctggtg
ttggtcatcattgctgtcatcttcctcatcatcctcattatcctgtggaggaaaaaacct
cattatgaagttcgttggaaggtgattgagtccgtgagtcctgatggacagcagtacacc
tacctcgaccccacccaactgccctacagcccaacctgggaaatagacagagaccatgta
aatcttggtcaggtgctgggttcaggggctttcggacgtgttgttgaggcaaccatctct
ggtctgattaattctcattctacaaaggcggccgtgaagatggtcaaaccgaggagtgat
gcagttcagtctctgatgtcagagttgaaggttttggttcatctcggtcctcacctgaac
attgtcaacctgctgggagcctgcacgagaggaggtcccgtctatctgatcactgagttt
tgttgtcatggagacctggtgaactacctgcagaggaataaacatgcctttctacaggga
gacacacagaccaagagtgacagtgatggaggttacatggacatgaacaaagaggagagc
gctcagtacgttgccatgaaggagctcagctatgccgacatcgaacccgccgtatatgag
acaccgtacacgcccacagaccagcaggaggcatcaaccctgctcctcagtgactctcct
ctcctcagcctcaatgatctcatcagtttctcttaccagattgctcaggccatggacttc
ctatcatctagaaagtgtgtgcacagagacctggctgcgaggaacgttctggtgtgcgag
gggaagctggtgaaggtctgtgactttggtttggccagagacctgctgaaggaccaggat
tacatcgcgaggggaaacagcttcctgccgctgaagtggatgtctccagagagcatcttc
cagaacatttacagctcgcagagcgacgtttggtcctacggagttctgctgtgggagata
ttctctctgggctgcagcccgtaccccgacctccccatgacccaggagttctactctgct
ctgaagagaggatacaggatgagtcgacccgaccactctcctcaggacatgtacgacctg
atgaaacgctgctgggaggagaaacctcagtccagaccttcattctcctcactgctcatc
gacatgggcaatatgctgactgacgactataaacagcgttacctgcagattgccgaagac
ttcctgaagggaggaaatccagctgtgcaccgatacaagcagagtttatccagaggtgca
gcggagcaggaggacgcgcacgcaagtgccacccctcaggtaaataggccagaggcggag
ccagtggaggcaggtccctcgcatgtcgcttacatcctgcctgttaccgaaatcacaatt
gaaagcagcgctggcgctgcgctggacacagtcagcccttcgatgtcagactctcccgcc
atctcatactctccagaagtgacatcatcggaggacagacaggaagctgtggggcctgag
gaggagagttgcctgtga
DBGET
integrated database retrieval system
