KEGG   Oreochromis niloticus (Nile tilapia): 100710179
Entry
100710179         CDS       T06104                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100710179
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100710179
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100710179
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100710179
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100710179
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100710179
  Exosomal proteins of epithelial cells
   100710179
  Exosomal proteins of breast milk
   100710179
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 100710179
NCBI-ProteinID: XP_005460643
Ensembl: ENSONIG00000012441
UniProt: I3K3H6
LinkDB
Position
LG3:complement(82490830..82498322)
AA seq 309 aa
MDSFYFCFSLFFIILCRADGYEYYTSSRCLFNSTELRDIEYIRSYYYNKTEYVRFSSSVG
KFVGYTEYGVREADQWNKDQGQGSWTRKGQLAAMRAQKETYCKPKIDFWYQSVLTKAVKP
SVRLHSIPPVYLNPAILVCSVYNFYPKEIKVSWLRNGQQVSPDITSTVEFANADWLYQTH
SYMEYTPRSGEKISCMVEHASLKEPLVTDWVPSMSESKKLMIVGAFGLILGLLFFLAGVI
YTRMCSRVMPLIDVHAMTPSGGHHPAMLLYKVYDFYTKKVASAKVIAAADLLEKTLPDEL
EPRTDAGSQ
NT seq 930 nt   +upstreamnt  +downstreamnt
atggattcattttatttctgcttcagcctcttcttcatcatcctctgcagagcagatgga
tacgagtattacacttcatcccgctgcctgtttaactccactgagctgcgggacatagag
tacatcagatcttactattacaacaagacagagtatgtcaggtttagcagcagtgtgggg
aagtttgttggatacactgagtacggtgtcagggaggcagaccaatggaacaaagaccag
ggacaaggatcctggacaagaaagggacagctcgctgcaatgagagctcagaaggagacg
tactgcaagccaaagattgacttctggtaccaaagtgttctgacaaaagcagtgaaaccc
tcagtcagacttcactccataccccctgtttatcttaatccggccatattggtctgcagc
gtctataacttttaccccaaagagatcaaagtgagctggttgagaaacggacagcaagta
agccctgacatcacttctactgtagagtttgcaaatgctgattggctctaccagacccac
tcctacatggagtacacacccaggtctggagagaagatctcctgtatggtggagcacgcc
agcctgaaggaacctctggttactgactgggtcccgtccatgtctgaatccaagaaactg
atgatcgttggagcctttgggctgatcctgggtctgctctttttcctggctggagtcatc
tacacaaggatgtgcagcagagtgatgccgctgattgatgttcatgccatgacgccctct
ggtggtcatcatcctgccatgctgctctacaaagtctatgacttctacaccaaaaaggtc
gcttctgctaaagtgatagcagcagctgatttgcttgagaagactttaccagatgagctg
gagcccaggactgatgctgggtcccagtag

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