Oreochromis niloticus (Nile tilapia): 100711027
Help
Entry
100711027 CDS
T06104
Name
(RefSeq) protocadherin gamma-C5 isoform X3
KO
K16497
protocadherin gamma subfamily C
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100711027
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Protocadherins
100711027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
100711027
NCBI-ProteinID:
XP_005467703
Ensembl:
ENSONIG00000035198
LinkDB
All DBs
Position
LG2:complement(23277715..23563596)
Genome browser
AA seq
985 aa
AA seq
DB search
MDSAQRKYSGGGRLWRVYFYLAWVSCASAQLSYSVSEELNPGSVVGNIAKDLTLTAQRIV
QRRLRVVSESSVQYFEVKQTTGDLIIKQKIDRENLCDLSSACSLHLQILMDDPLEIHRVV
VNVLDVNDNAPQFSTTNISLEISEAAAPGTQFRLESAHDPDVGTNSLRTYHLAANDFFTL
NVETKSDGRKFPELVVDKALDRERQASFRLLLTAVDGGQPEKSGSTLLLIDILDVNDNAP
VFDEPVKKVTLLENAALGTLVTKVNASDADSGSNGDISYLFSKYTPQHVLNLFTVDSKSG
EIRVKGVVDYEEMNAYHITVQARDGGSPAMEGSCNVIVTVVDVNDNAPEVKLVSLTESIR
EDSAPGTAIAFINTRDPDPGLNGNVKLTITPGLPFKLMSTFDMHYRLVTAGNLDRETVPE
YSVVIKATDAGSPPLSSQINFVVKVSDVNDNAPTFSQPSYSVDISENNAPSAPIAVVSAT
DPDLGENAHVSYSILPSMVQGSPISSYVYINPKSGHIYSMRSLDHEQLKAFRIEVQAEDA
GVPPRTSNVTVHVFVVDVNDNAPVIVHPSYSKDKRLELTVAPSASPGHLINKLVAVDADS
GHNAWLFYSIAPGPNAGMFRIGAHTGDLRTARKWDEEESGSTYDIVVIIQDNGDPPKSTS
VNITITVDEKAPANDAPIIPHHIPFYQRNGMPDITLYLIISLACVSAVSFITFVVLMVRC
LRHRGPGLGGSECCCYGHHRSSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQEPHTRTYR
PCYSTISSRSDFVFMKSPMLSHNNTLNMTLSKKYLMNSASEQKPPNNDWRFTQGQRPGPS
GPHMPYGTHIRWTPKNGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATATL
GPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQQALPPPQA
SAQPEPPKAAQTPASKKKSTKKEKK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggactccgcgcagagaaagtactcgggaggagggaggctgtggagggtttacttttat
ctagcatgggtctcctgtgcgtccgctcagctcagctattccgtatcggaggaactaaat
ccaggctctgtcgtggggaatatcgctaaagacttgactctcactgctcagcggattgtt
cagaggaggctgcgggtggtctccgaatcatcagtgcagtactttgaggttaagcagacg
accggcgatttgattattaaacaaaaaattgacagagagaatctgtgcgatttaagttca
gcgtgttcactacaccttcaaatacttatggatgatcctttagagatccatcgcgtcgtg
gtgaacgttctggatgtgaatgacaatgcgccgcagttttcaaccactaacatttctttg
gagatatctgaggcggccgcacctggcacacagtttcgtttggagagcgcgcacgaccct
gacgtgggtaccaactcgttacgcacgtatcatctcgcagcaaatgacttctttactttg
aatgtggaaactaaaagtgacggccgcaagtttccagagctagtggtggataaagctttg
gacagagagaggcaggcctcgtttcgcctgctgctcactgctgtggatgggggtcagcca
gagaaatctggctcaacacttctgctcattgacattctggacgtaaatgacaatgcgccc
gtctttgacgaacctgtaaagaaagttacactattagaaaatgctgcgctgggcacttta
gtaacgaaagtaaacgcctcagacgccgattcgggtagcaacggggacatatcgtatctt
tttagtaaatacacaccacagcacgttctcaatctattcactgtggattctaaaagcggg
gaaatccgtgtaaagggtgttgtggattatgaggagatgaatgcatatcacataacagtg
caggccagagatggtggctctcccgctatggagggctcctgtaacgtcattgtgaccgtc
gttgacgtgaatgacaacgcaccagaggtgaaactggtgtcactgactgagtctatcaga
gaggactcagcaccagggaccgctatagcattcataaacacacgggacccagaccctggt
ctgaatggaaatgttaagctgaccatcacgccaggtttaccattcaaactcatgtcaact
tttgacatgcattaccgcctggtcacagctggcaacctggaccgtgagactgtcccagag
tactcagttgtcatcaaggccactgatgctggttcccctcccctttcatcacaaatcaac
tttgtggtgaaggtgtctgatgtaaatgacaatgcccccaccttctctcagccttcatac
tctgtggacatctcagaaaacaacgctcccagtgcccccatcgctgtcgtttctgccact
gatccagaccttggtgaaaatgcacacgtctcttattcaatccttccaagcatggtgcag
ggctcacccatatcttcttatgtctacatcaacccgaagagcggtcacatctacagcatg
cgctctctggatcatgaacagcttaaagctttccgtattgaggtgcaggctgaggatgct
ggagtgccgccacggacatccaacgttactgtgcacgtgtttgttgtggatgtgaatgac
aatgcaccagtgattgtacacccctcctactcaaaagacaaaagattagagctcactgtg
gccccatctgccagtccagggcaccttataaataaactggtcgcagtggatgcagacagt
gggcacaatgcttggttgttttactcaattgctcctggaccaaatgctggtatgttccgt
attggggcacacactggggacctccgcacagctcgaaagtgggacgaggaggaaagtggt
tcaacttatgacattgtggtcatcattcaggataatggagacccacccaagtccacttct
gtgaacattacaataactgtggatgagaaggcaccagccaacgatgctccgattattcct
caccacatacctttctaccaacgcaatgggatgccagatatcactttgtaccttatcatc
tctctagcctgtgtgtcagcggtgtcctttatcacatttgttgttctcatggtgcgctgc
ctgagacaccgtggcccagggctgggaggctctgaatgctgctgctatggtcaccacagg
tccagccgctaccatcagaggcctagcaaggacctccacctgcagctcaatactgatgga
cccatacgatatatggaggttgtgggaggtccccaagagccacatacacggacctatagg
ccctgctactccactatatctagccgaagtgactttgtatttatgaaatcacccatgctg
agtcacaacaacacactcaacatgacgctcagcaagaagtaccttatgaactcagccagt
gagcaaaaacctcccaacaatgactggcgcttcacacagggacaaagacccggacctagc
ggtccccacatgccgtacggtacacacatacgatggacgccgaagaatgggacaagggca
actggaggacctgaggttgccatgggaactggcccctggccccagccccctactgaagct
gagcagctccaagccctgatggctgcagccaacgaagtgagtgaggctacagccaccctc
gggcccggcactatgggcttgagcacccgctacagcccccagttcaccctgcagcacgtg
ccagactatcgtcagaacgtctacatcccaggcagcacggccaccctcacctcaaacccc
cagcagcagcaggccacggcccagcaggccacccaacaggcactgccccctcctcaggcc
tcggctcaaccagagccccccaaggccgcccagactccagcctccaagaagaagtccacc
aagaaggagaagaagtag
DBGET
integrated database retrieval system
