Oreochromis niloticus (Nile tilapia): 100711575
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Entry
100711575 CDS
T06104
Name
(RefSeq) low-density lipoprotein receptor isoform X2
KO
K12473
low-density lipoprotein receptor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03272
Virion - Hepatitis viruses
onl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100711575
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100711575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100711575
Membrane trafficking [BR:
onl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100711575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
DUF5050
Psg1
Vgb_lyase
EGF
NADH_B2
Motif
Other DBs
NCBI-GeneID:
100711575
NCBI-ProteinID:
XP_019215411
Ensembl:
ENSONIG00000018056
UniProt:
A0A669E9E6
LinkDB
All DBs
Position
LG6:24578041..24601879
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AA seq
864 aa
AA seq
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MFGIWKGLAGLSACWCLLMLTHCLPQTDAAYICNANQFKCGNGRCITRRWICDGSDDCGD
GTDELPASCGVKICRDSQFSCGDPMSQCIPKDWQCDGKADCTNGADEKNCTAKQCDDHEF
RCANGQCISKSFVCDSDNDCSDGSDEASCHKPTCNPRSFQCNNSMCVPMVWRCDGDSDCS
DGSDEWPQNCEGRKPEKTPRCSSHEFQCANGDCIHGNWKCDGGFDCLDRSDEANCTHSTC
RSDEFQCKDGSCINKSLQCNGHHDCRDFTDEIECDTVCEGPNKFQCRSGECIDMEKVCNK
QNDCKDGSDEPAKECDNNECLTGNGGCSHHCNDLKIGYNCSCPAGYRLKADNKTCEDIDE
CAEPDTCTQICINLPGSYKCDCGEGYMIDPATKTCKAESGTVPTLYFTNRHEVRKLTVDR
SDYVRVIPQLKNAVALDMDMPNKMIFWSDLSLKKIYSSVIDVAGNSSHHSVVVDSGIEAP
EGIAVDWIHGNIYWTDSVLKTISVATTDGSKRKTLIATDLDKPRAITVDPVNNLMYWTDW
GEEAKIEKSGLNGADRTTLVKDNIVWPNGITLDMVNQRLYWVDSKLHSLSSIDVNGGARH
SLIINEEKLSHPLSLTVFEEKVFWTDLSNAAVFSANRLTGSDITELAKDLVQPEDIVLHH
ELKQPASSNWCTNGGCEFLCLPAPQNDPQSPRYTCACPDGMVLGPDMKKCVAESTAAPPK
TAAPLPPKGPTNPATPRQPDPTTTTTTTKKPTTTSAVQPSQKTEKPAVTAQGDRQAAVQP
EEAPPSSHPVALYVVLPLMIMALLVFGAMYFWRHWHRKNTNTIHFDNPVYQKTTEDELHI
CRNGSDGYVYPERQMLSMDDTDMA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatttggaagggacttgccgggctgtccgcttgctggtgtctgttgatgctt
actcattgtttgcctcaaacagatgcagcctacatatgcaacgccaatcagtttaagtgc
ggaaatgggaggtgcatcacccgcaggtggatttgtgatggaagtgatgattgtggtgat
ggaactgatgagctgcctgctagctgtggagtcaaaatctgtcgggattcacagttcagc
tgtggcgatcccatgagccagtgcataccaaaagactggcaatgtgacggcaaagccgac
tgtactaacggcgctgatgagaaaaactgcacggccaagcagtgtgacgatcatgagttt
cgttgtgccaatggccagtgcatatccaagagctttgtttgcgacagcgacaacgactgc
tcagatggctcagatgaggcttcctgtcacaaacccacctgtaaccctcgctccttccaa
tgcaacaactcaatgtgcgtgccgatggtgtggcgctgcgatggagacagtgactgctcc
gatgggtctgatgagtggccccagaactgtgagggaaggaagccagagaagacgcctcgc
tgcagctctcacgagttccagtgtgcaaatggggactgtatccatggcaactggaagtgt
gacggagggttcgactgcctggatcgttcggacgaggctaactgcactcattctacttgc
cgctcagatgagttccagtgtaaggacggctcctgcattaacaaaagcctccaatgtaat
ggacatcatgactgcagggacttcactgatgagattgaatgtgatacagtatgtgaaggc
ccaaacaagttccagtgtcgcagtggggagtgcatcgacatggagaaagtgtgcaacaag
cagaacgactgcaaggacgggtctgatgaaccagcgaaagagtgcgacaacaatgagtgt
ttgaccggaaatggcggctgctctcaccactgcaacgatctgaagattggctacaactgc
tcctgccctgctggatacaggctgaaggcggacaacaaaacctgcgaagacattgacgaa
tgtgctgagccggacacttgcactcagatctgcatcaacttgcctggcagctacaagtgt
gattgtggagagggctatatgattgaccctgcgaccaaaacctgcaaggctgaatcaggc
acagtgcccaccttgtacttcaccaacagacacgaggtgaggaagctgacagtggaccgc
agcgattacgtgcgtgtgatcccacagctgaagaacgcagtggctctcgacatggatatg
ccaaacaagatgatcttctggtctgacctgtctctgaagaaaatctacagctctgtgata
gatgtggctggcaattcctctcaccacagtgtggtggttgacagtgggatagaggcccca
gagggcattgcggtggactggatccatggcaacatctactggactgacagtgttttgaag
actatttctgtagcaacaacggatggcagtaagaggaagaccctgatcgcaacggacctg
gacaagccacgagccatcacagtcgatccagtaaacaatttgatgtactggacagactgg
ggtgaagaagctaagattgagaagagtgggctgaacggtgcggatcgcactactttagta
aaagacaacattgtgtggccgaatggcatcaccctggacatggtcaaccagcgtctatac
tgggtggactccaagctgcactctctctccagcatcgatgtgaatggaggggcccgacac
agtctcattattaatgaggaaaaactctcccacccgctctccctgaccgtctttgaggag
aaagtgttttggacagacttgagcaatgctgctgtgtttagtgccaaccgcttgacagga
agcgacatcaccgagctagcaaaggacctcgtccagccagaagacatcgtactgcaccac
gaactcaagcagccagccagttcaaactggtgcactaatggaggttgtgagttcctgtgc
ctacctgcccctcagaacgacccacagtctcccagatacacctgtgcctgtcctgatggc
atggtcctgggaccggacatgaagaaatgcgtggcagaaagcacagctgcgcctcccaaa
actgctgctccgctcccaccaaaaggtcccacaaatcctgctacacccaggcagccagac
ccgaccaccacaactacaaccaccaagaaacccacaactacctctgctgtgcagcctagt
cagaaaacagagaagcctgccgtcactgctcaaggtgacagacaagcagccgtgcagcct
gaagaagccccaccctcctcccaccctgttgctctctacgttgtgttgccactgatgatt
atggccctgctggtatttggagcaatgtacttctggagacactggcataggaaaaacacc
aacaccatccactttgacaaccccgtgtaccagaaaaccaccgaggatgagttgcacatc
tgcaggaacggctctgacggctacgtgtatcctgagcggcaaatgctgagcatggatgac
acagatatggcttga
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