KEGG   Oreochromis niloticus (Nile tilapia): 100711901
Entry
100711901         CDS       T06104                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100711901
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100711901
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100711901
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100711901
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100711901
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100711901
  Exosomal proteins of epithelial cells
   100711901
  Exosomal proteins of breast milk
   100711901
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 100711901
NCBI-ProteinID: XP_019212801
Ensembl: ENSONIG00000007445
LinkDB
Position
LG3:complement(82161500..82167968)
AA seq 340 aa
MDSSFLCFSLFFIILCRADGYEYYTSSRCLFNSTELRDIEYIRSYYYNRIEYVRFSSSLG
MFVGYTEYGVKEADQWNNDPGQLAAMRAQKEIYCTPNIDLWYRSVLTKYVKPFVRLHWTK
PPVDHHPAILACSIYDFYPKYIKVTWLRNGQRVTSNTTTTEELPDADWFYQIHSYLEYTP
KSGEKISCMVEHASLDLPLVTDWVPSMSESKKLMIIGAFGLILGLLFFLAGVIYTKMCSR
DGYTSLAHKSNVKQPGGWSKDAAALSLWRPQKEKFFKSVMPLIGVHAMAPSGGHHPAMLL
CKVYDFYPKKVASAKAIAAADLLEKTLPDELESRTDAGSQ
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggattcatcttttctctgcttcagcctcttcttcatcatcctctgcagagcagatgga
tacgagtattacacttcatcccgctgcctgtttaactccactgagctgcgggacatagag
tacatcagatcttactattacaacaggatagagtatgtcaggtttagcagcagtctgggg
atgtttgttggatacactgagtacggtgtgaaggaggcagaccaatggaacaatgatcct
ggacaactcgctgcaatgagagctcagaaggagatatactgcacaccaaacattgacctc
tggtaccgaagtgttctgacaaaatacgtgaaaccatttgtcagacttcactggacgaag
ccccctgttgatcatcatcctgccatattggcttgcagcatctacgacttctaccccaaa
tatatcaaagtgacctggttgagaaacggacagagagtaacctccaacacaacaacaact
gaagagcttccagatgctgattggttctaccagatccattcctatttggagtacacaccc
aagtctggagagaagatctcctgtatggtggagcacgccagcctggacctacctctcgtt
actgactgggtcccgtccatgtctgaatccaagaaattgatgatcattggagcctttggg
ctgatcctgggtctgctctttttcctggctggagtcatctacacaaagatgtgcagcaga
gatggatatacatctttggctcacaagtccaatgtgaagcagccagggggctggagcaaa
gatgctgcagctctgagcttgtggagacctcagaaggagaagttcttcaagtcagtgatg
ccgctgattggtgttcatgccatggcgccctctggtggtcatcatcctgccatgctgctc
tgcaaagtctacgacttctaccccaaaaaggtcgcttctgctaaagcgatagcagcagct
gatttgcttgagaagactttaccagatgagctggagtccaggactgatgctggttcccag
tag

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