KEGG   Oreochromis niloticus (Nile tilapia): 100712385
Entry
100712385         CDS       T06104                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X3
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:onl03036]
    100712385 (kdm6a)
Enzymes [BR:onl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     100712385 (kdm6a)
Chromosome and associated proteins [BR:onl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     100712385 (kdm6a)
   Histone demethylases
    100712385 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_12 TPR_16 TPR_19 TPR_11 TPR_9 TPR_CcmH_CycH TPR_7 ARM_TT21_C RPN7 ANAPC3
Other DBs
NCBI-GeneID: 100712385
NCBI-ProteinID: XP_003449637
Ensembl: ENSONIG00000016301
UniProt: A0A669D6H8
LinkDB
Position
LG16:31119220..31174492
AA seq 1450 aa
MKSCGVSLTAAASAAARSLGVAGNDEEKMASGKATEIEEDFPKLTAQEKESLVGIDSSLF
GFHRLQEDGARTKALLLKAVSCYDALILKAEGKVDPDIFCQLGHFNLLLEDYSKALSAYQ
RYFSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYINPSFSRAKEIHLRLGFMF
KVNTDYESSLKHFQLALIDSKLCTLSKAEIQFHIAHLYEIQKKYRAAKEAYESLLQTENL
PAQVKATTLQQLGWMHHTVEQLGDKGTKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSSI
GKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWMD
LGTLYESCGQPHDAIKCYINATRSKACLNTAALTQRIKLLQAQLCNLQPGSLQNKSKMLP
SIEEAWSLPIPAELTSRQGTLNTAQTQQACKGEGGQSASNHADPQASPAKKKRTASPAKG
AADSWGNTTNQQQIKLQHLEHLRTNRANLSPHQLQMLEQLEKQFSLMQQHQQMRQQAAAG
GQLRPSLPNGPLAEPSPHHAGFSRTSPLNHTATQPPCVTQPTANGSCSTSPSAGLLRHPD
KNHNLGLGGGGASNGNVPYPQQNSLPHNCTAASHPSTSSTTSSPSQTDETWRSQQRNTTT
QGLQKGPGSHSAGPNGEPPFSSSSSPQTSFTSSGILNQVGHSSGPCTASSSASSLSPTSP
QTTPNHLSSPPHSATTSGVHTKDTTPSGGNTGSSVAAAALPSGQEAAVRHSGGTSHSPGT
TPTQGLTNHIQLRVTDGSASASLPSSPAPSVLSLDNPLSALIKGKANTTSNDNNNNYSNH
GGSSSEKMNNVHPGLNGATKPISEHSVASSPLSATATPSPCSADPHPTNSLPCLNSPSST
NSQGPTLNGKGLEDSQSPMKVEPCGGPHRHSGPAGLAPWSSVSIYPSSSEVLKACRNLGK
NGLSTSNILLDRCPPPRPPRAPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPTN
PVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPTDENWDPSGTRKMWRCES
SRSHTTIIKYAQYQASSFQESLREENEKKKEVEAEAGSSDGVRRRKGPFKHIKFGTNIDL
SDDKKWKQQLQELTKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENN
NFCSVNINIGPGDCEWFAVPEPYWGVINDFCEKNNINYLMGSWWPNLEDLYETNVPVYRF
IQRPGDLVWLNTGTIHWVQAIGWCNNIAWNVGPLTAHQYKLAVERYEWNKLQSVKSIVPM
IHLSWNMARNIKVSDHKLYEMIKYCLLRTLKQCQMQRELLLAAGKELVWHGRTQNEPAHY
CSICEVEVFDLLFVTSESNSRKTYVVHCQDCARRGSADLDNFVVLEQYKIEDLMQVYDQF
TLASPLPSSS
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcaccgccgctgcctctgctgctgcccggagtctcggc
gttgctggtaatgacgaggagaaaatggcgtcgggaaaagcgactgaaatcgaagaggac
tttccgaagctaacagcgcaagagaaagagagcttggtcggaattgacagttcactgttt
ggatttcataggcttcaagaagatggcgccagaacgaaggccttgctgttaaaggctgtt
agctgctatgatgccctcatcctgaaagcagaggggaaagtggaccctgacattttctgc
cagctcggccacttcaaccttctgctggaggattattcaaaagcattatctgcataccag
aggtacttcagtttacagtcggactactggaagaatgctgcctttttatatgggcttggc
atggtttacttccattacaatgcatttcagtgggcaatcaaggcattccaggaggtgctt
tacatcaatcccagtttctcaagagctaaagagattcatctgagactgggattcatgttt
aaagtcaacacagactacgagtcaagcttaaagcattttcagctggctttgatcgactcc
aagctctgcactttgtccaaagctgaaattcagttccacatcgctcatttatatgagatc
cagaagaaatacagagcagcgaaggaagcgtatgaaagtctgttgcagacggaaaatctt
cctgcacaggtgaaggcgaccacactgcaacaacttggctggatgcatcacacagtggaa
cagttgggggataaaggcaccaaggacagctatgccatccagtgtctgcaaaagtcttta
gaggcagacccaaactctggccagtcttggtactttcttggcaggtgctactccagtatt
gggaaggtgcaggatgccttcatctcttaccggcagtccattgataaatcagaggccagt
gctgacacctggtgctctataggggtgctttaccagcagcagaaccagcctatggatgca
ctgcaggcttacatctgtgctgttcaactggaccacagccacgccgccgcctggatggat
ctgggcactctctacgaatcctgcggccagccgcacgacgctatcaagtgctacatcaac
gctactcgcagcaaggcctgcctcaacactgctgcactcacacaacgtatcaaactgctg
caggctcagttgtgtaacctacaaccaggtagtctgcagaataagagtaaaatgcttcct
agtattgaggaggcatggagcctacccattcctgctgagctcacatccaggcaggggacc
ctgaacactgcacagacacagcaggcctgtaaaggggagggaggccagtctgccagcaat
catgcagatccacaggccagtcctgctaagaagaaacgcactgccagcccagccaagggt
gctgcagactcgtggggaaacaccaccaatcaacagcaaatcaagcttcagcacctggaa
cacttgcggaccaaccgagcaaacctcagcccccaccagttgcagatgctggagcagctg
gagaagcagttctctctcatgcagcaacatcagcagatgcggcagcaggcagcagcgggt
ggccaactgaggcccagccttcccaacggcccattggctgagccctctccccaccatgca
ggcttctctcgcacctcccctctcaatcacacagccacccagcccccgtgtgtcactcag
cccacagccaatggatcctgttccacaagtccctcagcggggctgcttagacacccggac
aaaaatcacaacctgggactgggaggtggcggcgcgagcaacggaaacgtgccttacccg
cagcagaactctctacctcacaactgcacagccgccagtcaccccagcaccagcagcact
accagtagtcccagtcaaacagatgagacatggaggagccaacaacgcaacactaccact
caggggcttcaaaaaggtccaggttcacattcggcaggtcctaatggagaaccccctttc
tcttcttcctcctcccctcagacctcgttcacatcctctggcattctgaatcaggttgga
cattcctctgggccctgcactgcctcttcctctgcctcgtctttatcccccacttcccct
cagacaacccccaaccacttgtcctcgcctccccactccgctactacctcaggggtccac
accaaagacaccacgccttcagggggcaacaccggtagcagtgttgcagctgccgctttg
ccatcaggtcaagaggctgccgtcaggcattccggagggacatcgcatagtcccggcacc
acccccacgcagggattgactaatcacatccagctgcgggtgacggacggctctgccagc
gcgtctctgcccagctctcctgcccccagcgtgctcagtttagacaatcctctctcagcc
ttgataaagggaaaagctaatactaccagtaatgacaataacaataactacagcaaccac
ggagggtcttcctcagagaaaatgaacaatgtccatccaggtctcaatggcgccaccaag
ccaatttcagagcactcagtggcatcctcgccactttctgccactgcgacgccctctcca
tgttcagcagaccctcaccccactaacagcctcccctgccttaacagcccgtccagtaca
aacagtcaggggcccacgctcaatggaaaggggctggaggactcccagagcccaatgaag
gtggagccttgtggggggcctcatagacattctggccctgctggcctggctccctggtcc
tcagtttccatctaccccagctccagtgaagtgctcaaagcatgcaggaatctggggaag
aacggcctgtcgaccagcaacatcctcctggacaggtgtcccccaccgcggccccctcgt
gcaccgtctcctccactgccaaaggacaaactcaatcccccaacacccagtatttatcta
gaaaacaagagggatgccttcttccctccccttcatcagttctgcaccaatcccaccaac
ccggtcactgtcatcagaggattggctggagcactcaaactagacttgggcctgttctcc
actaagacgctggtggaggctaacccagaccatctggtggaggtgcggactcagctggct
cagcccaccgatgagaactgggatcccagcggcaccaggaagatgtggcgctgtgagagc
agccgctcccacaccaccatcatcaaatacgcccagtaccaggcctcgtccttccaggag
tctctacgggaagaaaatgagaagaaaaaggaggtggaagcggaggcgggttcctcagac
ggtgtgaggcgaaggaagggtcctttcaaacacatcaagtttggcaccaacatcgacctg
tcagatgacaagaagtggaagcagcagctgcaggagctgactaagttgcctgccttcgcc
agggtggtgtcagctggtaacctgctcagtcacgtaggtcacacaatcctgggcatgaat
actgtgcagctctatatgaaggtgccagggagcaggacaccaggtcaccaagaaaacaac
aatttttgctccgtcaatattaatattggtcctggggactgcgagtggtttgctgtgcct
gagccttactggggcgtcatcaatgacttctgtgaaaagaacaacattaactacctgatg
ggctcctggtggcccaacctggaggacttgtacgagaccaatgtgcctgtttaccgcttc
atccagcgtcccggggacttggtgtggcttaatacaggcacaattcactgggttcaggcc
atcggctggtgcaacaacatcgcgtggaatgtcggaccccttacagcccatcagtacaag
ctggcggtggagcgctacgagtggaacaaactgcagagcgtcaaatccatcgttcccatg
atccacctctcatggaacatggccaggaacattaaagtctcagaccacaagctttatgag
atgatcaagtattgtttgttgcgcactctgaagcagtgtcagatgcagagggagctgctg
ctggctgctgggaaggaactggtgtggcatgggaggacccagaacgagccggcacactac
tgcagcatctgtgaagtggaagtgtttgacctgctgtttgtaaccagcgagagcaacagc
aggaaaacatacgtggtgcactgccaggactgtgcccgtagggggagcgctgacctggac
aactttgtggtgctggagcagtacaagatagaggacctcatgcaggtttatgaccagttc
acacttgcgagtcccctgccttcctcctcttga

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