Oreochromis niloticus (Nile tilapia): 102081105
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Entry
102081105 CDS
T06104
Name
(RefSeq) lymphotoxin-alpha isoform X2
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04060
Cytokine-cytokine receptor interaction
onl04150
mTOR signaling pathway
onl04210
Apoptosis
onl04217
Necroptosis
onl04350
TGF-beta signaling pathway
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04625
C-type lectin receptor signaling pathway
onl04920
Adipocytokine signaling pathway
onl05132
Salmonella infection
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102081105
04350 TGF-beta signaling pathway
102081105
04150 mTOR signaling pathway
102081105
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102081105
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102081105
04217 Necroptosis
102081105
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102081105
04621 NOD-like receptor signaling pathway
102081105
04622 RIG-I-like receptor signaling pathway
102081105
04625 C-type lectin receptor signaling pathway
102081105
09152 Endocrine system
04920 Adipocytokine signaling pathway
102081105
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102081105
09171 Infectious disease: bacterial
05132 Salmonella infection
102081105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
102081105
00536 Glycosaminoglycan binding proteins [BR:
onl00536
]
102081105
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Tumor necrosis fators
102081105
Glycosaminoglycan binding proteins [BR:
onl00536
]
Heparan sulfate / Heparin
Cytokines
102081105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
COG2_C
Motif
Other DBs
NCBI-GeneID:
102081105
NCBI-ProteinID:
XP_005464346
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All DBs
Position
LG12:complement(3478595..3483426)
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AA seq
234 aa
AA seq
DB search
MEEDRWGFEGEEAVLQSPNTSLQLLPPNATRNRRMAKLLALVLLLVLAGVLPLLITVLLG
SQRHAPPGSQPTTPPDLSVNKLETSRHQNLDNPAAMLTAPVGNNTNGPYLQWAHDIGNAY
CHGGFSYSNGDLVVPRDGLYSVYLQITYSGSVCPFHKKLMNKVLHSSEEYNNDMTLLSSI
HTMSCSEDVWSKSLYTAGFFFLKAKDKLRVMSSHPEYITKKEYEVFFGAVLFPH
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacagatggggcttcgaaggggaggaggcagtgcttcaaagcccgaacacc
tctcttcagttactgccgccgaacgcgacacgaaacaggcgaatggctaagcttttagcc
ctggtgctgcttctggtgcttgcaggagtcctgcctttactaatcacggttttactcgga
agtcaaaggcatgcaccgccgggcagccagccaaccacgccacccgacctgtcagtcaac
aaactagaaacttcaagacatcaaaacttggataatccagctgccatgctaacagctcct
gtagggaataacacgaatgggccgtaccttcaatgggcacatgacatcggaaatgcttac
tgtcacgggggcttcagctactccaatggggatcttgtggtgcccagagatggcttgtac
agtgtctacctgcagatcacgtatagtggttcagtgtgtcctttccataaaaaactgatg
aacaaggtgttgcatagttcagaagaatacaataatgatatgactctcctctcatcaatc
cacacaatgagctgcagcgaagatgtctggagtaaatccctctatacagctggcttcttt
ttcctgaaagcaaaagacaaactacgtgtgatgtcatcacatccagaatatattaccaag
aaagaatacgaagtgttctttggcgctgtgctttttcctcactaa
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