KEGG   Oreochromis niloticus (Nile tilapia): 102081105
Entry
102081105         CDS       T06104                                 
Name
(RefSeq) lymphotoxin-alpha isoform X2
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04010  MAPK signaling pathway
onl04060  Cytokine-cytokine receptor interaction
onl04150  mTOR signaling pathway
onl04210  Apoptosis
onl04217  Necroptosis
onl04350  TGF-beta signaling pathway
onl04620  Toll-like receptor signaling pathway
onl04621  NOD-like receptor signaling pathway
onl04622  RIG-I-like receptor signaling pathway
onl04625  C-type lectin receptor signaling pathway
onl04920  Adipocytokine signaling pathway
onl05132  Salmonella infection
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102081105
   04350 TGF-beta signaling pathway
    102081105
   04150 mTOR signaling pathway
    102081105
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102081105
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102081105
   04217 Necroptosis
    102081105
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102081105
   04621 NOD-like receptor signaling pathway
    102081105
   04622 RIG-I-like receptor signaling pathway
    102081105
   04625 C-type lectin receptor signaling pathway
    102081105
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102081105
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102081105
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102081105
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:onl04052]
    102081105
   00536 Glycosaminoglycan binding proteins [BR:onl00536]
    102081105
Cytokines and neuropeptides [BR:onl04052]
 Cytokines
  Tumor necrosis fators
   102081105
Glycosaminoglycan binding proteins [BR:onl00536]
 Heparan sulfate / Heparin
  Cytokines
   102081105
SSDB
Motif
Pfam: TNF COG2_C
Other DBs
NCBI-GeneID: 102081105
NCBI-ProteinID: XP_005464346
LinkDB
Position
LG12:complement(3478595..3483426)
AA seq 234 aa
MEEDRWGFEGEEAVLQSPNTSLQLLPPNATRNRRMAKLLALVLLLVLAGVLPLLITVLLG
SQRHAPPGSQPTTPPDLSVNKLETSRHQNLDNPAAMLTAPVGNNTNGPYLQWAHDIGNAY
CHGGFSYSNGDLVVPRDGLYSVYLQITYSGSVCPFHKKLMNKVLHSSEEYNNDMTLLSSI
HTMSCSEDVWSKSLYTAGFFFLKAKDKLRVMSSHPEYITKKEYEVFFGAVLFPH
NT seq 705 nt   +upstreamnt  +downstreamnt
atggaggaagacagatggggcttcgaaggggaggaggcagtgcttcaaagcccgaacacc
tctcttcagttactgccgccgaacgcgacacgaaacaggcgaatggctaagcttttagcc
ctggtgctgcttctggtgcttgcaggagtcctgcctttactaatcacggttttactcgga
agtcaaaggcatgcaccgccgggcagccagccaaccacgccacccgacctgtcagtcaac
aaactagaaacttcaagacatcaaaacttggataatccagctgccatgctaacagctcct
gtagggaataacacgaatgggccgtaccttcaatgggcacatgacatcggaaatgcttac
tgtcacgggggcttcagctactccaatggggatcttgtggtgcccagagatggcttgtac
agtgtctacctgcagatcacgtatagtggttcagtgtgtcctttccataaaaaactgatg
aacaaggtgttgcatagttcagaagaatacaataatgatatgactctcctctcatcaatc
cacacaatgagctgcagcgaagatgtctggagtaaatccctctatacagctggcttcttt
ttcctgaaagcaaaagacaaactacgtgtgatgtcatcacatccagaatatattaccaag
aaagaatacgaagtgttctttggcgctgtgctttttcctcactaa

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