Ostrinia nubilalis (European corn borer): 135073487
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Entry
135073487 CDS
T10851
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135073487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onu03400
]
135073487
Enzymes [BR:
onu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
135073487
DNA repair and recombination proteins [BR:
onu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
135073487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
TPR_14
RNA_ligase
DNA_ligase_IV
BRCT
TPR_19
TPR_8
TPR_1
TPR_6
TPR_CcmH_CycH
NatA_aux_su
HAT_PRP39_C
BRCT_2
TPR_12
BTAD
Motif
Other DBs
NCBI-GeneID:
135073487
NCBI-ProteinID:
XP_063823744
LinkDB
All DBs
Position
1:14044998..14059338
Genome browser
AA seq
1327 aa
AA seq
DB search
MDLALPGSSSMDMEIDINPEKDLTSKFLNGEMSFAEYSSEWYDVEDEEDNDDTSKPSDED
RLSPSAHFMEKGTLRRRKCTRLSPALMGLMGEANLRFVRGDKEMAEKMCHEIIKQVPTAP
EPYQTLAQIYEHDAEKSLQFSLLAAHLRPSDANEWLRLANISNQKNDTRQEMLCYTQAVR
ADPHNLDIHLKRLEVLSILEDMKYPVHTMNVSRVKCYHKIVTSLPASEGEVIMKYAKMAA
TLYHNSNEVERSLEVMGAAYKKCSSLFTHEDLNILLELLISRKQYQTCLDIFVANVGVEI
EAEIQTVKNSDNGAIEEHTNYLNCSIPENLHIDLKSKLLVCFIHLGSINLVQTLLQDFLS
NDVEKAGDLYMDIEEALSSAGYHELAMKLLDPLVKNNSFDLGAVWLKHAECLHNLGREDD
AIESYYKVLKHVPQHPDARRKLFTILEKKGKIDEALNILQQDYRYIVSASLLYEQCLALK
KYNRLLKYLENTNLYPILRLLLPKYERERSPYNMKETKLAQLLVRVLSLSKQSPAAKRLI
NFRSVSNTQDSDFAGVAYYALKGILGKNKGDLTVEDINTILDKIATAEVGNKARVLNEAF
GYAIRHLTPEQLKWFLRLILKDLKLGIETKRILAAFHPDAPEYFETCNSISKVCEELEDG
DIRPLEMGVKMFYAISPMLSERLDVTEIHRQLFFDSTTYIVENKFDGERFQIHMENGIFE
YFSRKGHKYSDNYGKTYESGLLTPFLKDCFNPEVESFIIDGEMMGWHKANHYYSSKGISF
DVKKITVRSVFRPCFCAFDVLYYNGKALVGSAERGGVPLKERLEILDSMFTDVTGVIQHS
RRETVKDSTDVLNKLNEAIENQDEGIVVKDVESYYLPSRRNAGWYKVKPEYTEGTMDDLD
LVIIGADEAENKKQGRAKSFHVACLDVTGGADAPRWVSVGRVATGLSFDERERLCVALER
RWVPAADAPPPPELDFNKEKPDFWVMPEHSTVLQVRATELIQSVGFGTDYTLRFPRVVKI
RDDKPVRDVMTLEEFNALVSNKGPVVKLSSTQVRKESMGEGRSLRKRVAKTVKVADQFVT
TPSSSVEVVSKALLGRKVCILSDDDDCKKLELRNIVESHGGTFVSNIGPDTWCAVVGRIT
RRENEIIKSQEVDVTTTAWLRSLPRSDSPCILPPLETLAMKKATRLAMSNDYDCFGDSYT
EPIDEATLRKCFEKMDRNEPQIYLTKREMLSLDRELFGATNPHSFLRACSLHVACRSGAR
ASQAAMRGAARADVLSPALTHVVLPADAPRAEVARLKRKLTATIVSENWLEACFAAKALV
PEDEFIL
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggatttagcattacctgggtcttcttcaatggatatggaaatcgatatcaatcctgag
aaagatttaactagcaaatttctaaatggtgaaatgtcatttgccgaatattcaagcgag
tggtatgatgttgaggatgaagaggataatgatgatacaagtaaaccaagcgacgaggat
cgtttatcgccttctgctcattttatggaaaagggtacacttcggcgtcgtaagtgcaca
cgactatcaccagctctgatgggtttgatgggtgaagccaatttaagatttgtaagaggt
gacaaggaaatggcagagaaaatgtgtcatgaaattattaaacaagtgcctacggctcca
gaaccatatcaaacacttgcacaaatatatgagcatgatgctgaaaaatcacttcagttt
tcattgttagctgcacatctccgtccatcagatgctaatgagtggttgagactggcaaac
atttccaatcaaaaaaatgacaccaggcaagaaatgctgtgctacactcaagcagtcaga
gctgatcctcataatttagacattcatttgaaaaggcttgaagttttatctattttggaa
gatatgaagtaccctgtgcataccatgaatgtcagccgtgtcaaatgctatcacaaaata
gtgacatctctgcctgcaagtgaaggagaagtgatcatgaagtatgctaaaatggctgca
actttgtaccacaatagcaatgaggttgagagatctcttgaagttatgggtgctgcatac
aaaaaatgctcctctctctttacccacgaagatttgaatatacttttggagctgctaata
tcacgaaaacaatatcaaacatgcttagatatatttgtagctaatgttggtgtggagatt
gaagctgaaatacaaactgtaaaaaattctgataatggtgcaattgaagaacacacaaat
tacttgaactgttctattccagaaaacttgcatattgatttgaaaagcaaattactagtt
tgtttcatacatttagggtctattaatttagttcaaacccttttacaagattttttatct
aatgatgtggaaaaggctggtgatttatacatggatatagaggaagctctatcttctgct
ggctaccatgagttagctatgaaactattggatcctttagttaaaaataatagtttcgat
cttggcgctgtttggcttaaacatgctgaatgtcttcataacttaggaagagaggatgat
gccattgaatcatattataaagttctaaagcatgttcctcagcatccagatgcccgtcga
aaattatttaccattttagagaaaaagggaaaaattgatgaagcactgaatattttgcaa
caagattacagatacattgtcagtgctagcttgctttatgaacaatgtttggcattaaaa
aagtataaccgcttacttaaatacttagaaaatacaaatttgtatccgattttgaggttg
ttattgcctaaatatgaaagagaaagaagtccatataatatgaaagagactaaacttgcc
caattactcgtcagagtgttgtctctaagcaagcagtcgccagccgctaaaagattaatt
aactttagatcagtaagtaatactcaggatagcgattttgctggtgtggcatattacgct
ctaaaaggaattcttggtaaaaacaaaggcgatcttactgtggaggatatcaacacaata
ctggataaaattgccacagctgaagttggaaacaaagcacgggttctaaatgaagcattt
ggatatgctattaggcatttaacacctgaacagttaaaatggtttttgagacttatcctc
aaggatttgaaacttggtattgaaacgaaacgtattttggctgcctttcacccggatgct
cctgaatattttgagacttgcaatagcatttctaaggtgtgcgaagaattagaagatgga
gacatacgtcctttagaaatgggtgttaaaatgttttatgcgattagtcctatgctctcc
gaaagattggacgtcacggagatccatcgacaactcttttttgatagcacaacttatatt
gtggaaaataagtttgacggggaaagatttcagattcatatggaaaacgggatatttgag
tatttttcaagaaaaggccacaagtattctgataactacggtaagacatacgagtctggc
ctactgacaccattcctcaaggactgttttaacccggaggtggagagtttcattattgat
ggggagatgatgggatggcacaaagcgaatcattattatagttctaagggtatatcattt
gatgtcaaaaagataacagtcagatcagtgttccggccttgtttttgtgcttttgacgtc
ttatattacaatggcaaagcgttagtgggatccgcagaaagaggaggagtaccactcaag
gaaagactggagatcctagactccatgttcaccgatgtaacgggagttatccagcacagc
cggagagaaactgtcaaagatagcaccgatgtattgaacaagctaaatgaagctatagag
aatcaagatgaagggatcgtggtgaaagatgtggaatcatactacctgcctagtcgacga
aacgctgggtggtacaaagtgaaaccggagtatactgaaggaactatggacgatctcgac
ctcgtaataattggagctgacgaagctgaaaataagaaacaaggtcgagccaagagcttc
catgttgcttgcctcgacgtcacaggaggagccgatgccccgcgctgggtgtcggtgggc
cgcgtggccaccgggctgtcgttcgacgagcgcgagcggctgtgcgtggcgttggagcgg
cgctgggtgccggccgccgacgcgccgccgccgcccgagctcgacttcaacaaggagaag
ccagacttctgggtgatgccggaacattccacagtattacaggttcgcgccaccgaattg
atccaaagcgtgggcttcggcaccgactacacgctgcgcttcccgcgcgtcgtcaagatc
cgcgacgacaagcccgtccgtgacgtcatgaccctcgaagagtttaatgcactcgtctcg
aacaaaggaccagttgtgaagctgagctcaactcaagtgcggaaggaatcgatgggcgaa
ggaagaagcctcagaaagcgcgtcgctaaaacagtgaaggtggcggaccagttcgttacc
acgccttcgagctcagtggaggtggtctccaaggccctgcttggcaggaaagtgtgcatc
ctgtcggacgacgacgactgcaagaaactagaactgaggaatattgtagaatcgcacggc
gggactttcgtttcaaatataggtccagacacctggtgcgcagtggtcggccggatcaca
agaagggagaacgaaataatcaaatcccaagaagtggacgttaccaccacggcctggctg
cgatctctaccgcgctcggactcgccgtgcattctgccaccgcttgaaacgctcgcgatg
aagaaagcgaccagacttgctatgagcaatgattatgattgcttcggcgacagctacacc
gagccgatagatgaggctactttgcggaaatgctttgagaagatggatagaaatgagccg
caaatctacctgaccaagcgcgagatgctgagcctggaccgcgagttgttcggcgctacc
aacccgcactcgttcctgcgcgcctgctcgctgcacgtggcgtgccgcagcggcgcgcgc
gcctcccaagccgccatgcgtggcgccgcgcgcgccgacgtgctatcgcccgcgcttaca
cacgtagtattacccgctgacgcgccgcgtgctgaggtagcgagactaaaacgcaagctt
acagccacgattgtgtctgagaactggctggaagcctgcttcgcggcaaaagcactcgtg
cccgaggatgagtttatactgtaa
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