Ostrinia nubilalis (European corn borer): 135079502
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Entry
135079502 CDS
T10851
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135079502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onu03041
]
135079502
Spliceosome [BR:
onu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135079502
Complex C
U5 SnRNP specific factors
135079502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
FANCL_d3
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
135079502
NCBI-ProteinID:
XP_063830232
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All DBs
Position
2:complement(1623472..1648393)
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AA seq
976 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSDDDQSVYGQDNRDADEDAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKHKKFQVQEQQLPETNYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLMRQTHPGTINNDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTLCINKIDRLILELKLPPADAYYKLRHIIDELNSMLETHQPQDNPT
EPATVFSPLLGNVCFASSLYDVCFSLGSFAAMYAAAHPGAGLRSAELAGWLWGDIYFNAK
TRRFTKKQPHASAQRSFVEFILEPLYKIFAQVVGDVDDTLPAVLSELGIKLTKQEAKLNV
RPLLRLVCSRFFGDFSGFVDMVVTHVPSPLDAAERKVGHTYRGTEGALREDMLRCDQSGR
LVAHTAKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSSHDEEDSRIMNVGRLWIY
EARYKVELNRVPAGCWALIEGVDQPIVKTCTIVSAEEDEELHTFRPLRFNTQAVVKIAVE
PVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKTIVIRPLEPQPATHLAREFMVKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQLN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggacggggatctctatgacgagttcggaaattatatcggccctgacctagagtcggat
tccgacgatgaccagagtgtttacggccaggacaacagagacgccgatgaggatgccatg
gaggaggacgaggacgctgatgcggagcccgaggtggctcctatgtccgtcgtccttcac
gaggataaacggtattaccctcaagcagtagaagtctacgggcctgatgttgaaacggta
gtacaagaggaggatacacaagcactagacaagccgctggtggaacctgtgaagcacaag
aagtttcaagtgcaggaacaacagttaccggagaccaactatgacatggagtacttggcg
gatatgctggataataccaatttgatgaggaatatcactttgatgggacatttgcataat
ggtaaaacttcatttgtggactgtctaatgaggcaaacccaccctggcaccataaacaat
gacactacaatcccgatgcggtacacggacacattatttgtggaacaagagcgaggagtg
tctatcaagtctatgccagtcactctgctcctcaagaacataaagggaaagtcacacttg
ttaaacatcatggacacacctggacatgttaattttagtgacgaagtcacagctgctttg
aggatttctgatggtgcggtgctattcgtcgacgcagcagaaggcataatgctgaataca
gagcgtctgctacgtcacgcagtgcaagagcgcgttcctctcacactgtgtatcaacaaa
atcgaccgcctgatcttagaactgaagctgccgcccgcagacgcttattacaagctgcgg
catattattgacgagctcaattccatgctggagacgcatcagccgcaggataaccccacg
gaacctgctacagtgttttcgccacttctgggcaacgtgtgcttcgcctcatcgttatac
gacgtgtgcttctctcttgggtcatttgctgcgatgtatgcggcggcgcacccgggcgcg
gggcttcggtccgcggaactggccggctggctgtggggagacatctacttcaacgctaag
accagacgcttcaccaagaagcaaccgcacgcgtctgcgcagagaagcttcgtggagttt
attttggagccgctttacaagatctttgctcaggtggtaggcgacgtagacgatacattg
ccggcggtgctgagcgagctcggcatcaagctgacgaagcaggaggccaagctgaacgtg
cggccgctgctccggctggtctgcagccgattcttcggggatttctctggcttcgtggac
atggtggtgacccacgtgccttcgcccctcgacgcggcggagcgcaaagtgggccacacg
tacagaggcaccgagggggcattacgcgaggacatgctgcgctgcgaccagtccggccgg
ctcgtggcgcatactgccaagatgtaccccactgatgattgcaccttcttcctggttcta
gcgcggataatgtcaggcacattatacgcggggcagacggtgcgagtgttaggagagaac
tacagctcgcacgacgaggaggactcgcgaatcatgaacgtcggccgcctgtggatatac
gaggcccggtataaggtggaactgaaccgcgtaccggccggctgctgggcgctgatagaa
ggcgtggaccagcccatcgtgaagacctgcaccatagtctccgctgaggaagacgaggag
cttcacacttttaggccgctgcgattcaacacgcaagccgtggtcaagatcgctgtggag
ccggtcaacccgtccgagctgccaaagatgttggatggactcaggaaggtgaacaaatcg
tatcccctcctttcaacgcgcgtggaggagagcggcgaacacgtgatattgggcacgggc
gagctgtacctggactgcgtcatgcacgacctgcgcaatatgtattcggagatcgacatc
aaagtcgcggacccggtagtctcattctgcgagacagtagtagaaacctcatcgctgaag
tgctttgcggagacgcccaacaagcgaaacaagctgaccatgatagcggagccgctcgag
cgcgggctcgccgaagacatcgaggccggcgccgtctgcgtcacgtgggaccgcaagcgc
ctcggcgagttcttccagaccaaatacgactgggacttgctggcggcgcgttcgatctgg
gcgttcgggcccgacaccaccgggcccaacatcctggtcgacgacacgctgccgtctgaa
gtcgacaaacatctgctggcctctgtcaaggacagcatcgtgcaaggcttccaatggggc
acgcgcgagggcccgctatgtgaggagcccatcagaaacgtgaagttcaagatcctggac
gcggtcatagcacaggagccgctacacaggggcggtgggcaaatcattcccactgccagg
agggtggcatattctgcgttcctgatggcgacgccgcggttgatggagccctatttattc
gtggaggtgcaggcgcccgctgactgtgtctcagcagtttacaccgtgctcgctaagcgg
agaggtcacgtgacgcaagacgcgcccgtgccgggttcaccattatacacgatcaaagcg
ttcgtgccggccatcgactcgttcggcttcgagacggatctacgcacgcacacgcaggga
caggccttctgtctgcaggtgttccatcactggcagatcgtgcctggtgacccgctggat
aagactatcgttatacgcccgctcgagccgcagcccgccacgcacctggcgcgcgagttc
atggtcaagacgcggcgccgcaaggggctcagcgaggacgtgtccatcaacaagttcttc
gacgaccccatgctgctggagctcgcccgccaagatgtacagctcaattga
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