Orcinus orca (killer whale): 101270492
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Entry
101270492 CDS
T05247
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04657
IL-17 signaling pathway
oor04926
Relaxin signaling pathway
oor04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
101270492 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
101270492 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
101270492 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oor01002
]
101270492 (MMP13)
Peptidases and inhibitors [BR:
oor01002
]
Metallo peptidases
Family M10
101270492 (MMP13)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
101270492
NCBI-ProteinID:
XP_004282241
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All DBs
Position
8:complement(79296635..79307582)
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AA seq
471 aa
AA seq
DB search
MYPGVLAAFLFLSWTHCWSLPLPNDEDSDDLSEEDFQFAENYLKSYYYPLNPAGILKKTA
ASSVVDRLREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDLTHYEVEKAFKKAFKVWSDVTPLNFIRIQNGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFILPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGET
MIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGY
DILEGYPRKISDLGFPKEVKKISAAVHFEDTEKTLFFSGNQVWSYDETNHMMHKDYPRLI
EEDFPGIGDKVDAVFEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtacccaggcgtcctggctgccttcctcttcttgagttggactcactgttggtccctg
cctcttcccaatgatgaagattctgacgatttgtccgaggaagacttccagtttgcagag
aattacctgaaatcatactactatcctctgaatcctgctggaatcctgaagaagacggca
gcaagctctgtggttgacaggcttagagaaatgcagtcttttttcggcttagaggtgact
ggcagacttgatgataacaccttagacatcatgaaaaaaccaagatgtggggtccctgat
gtgggtgaatacaatgtttttcctcgaactctcaaatggtccaaaatgaacttaacctac
agaattgtgaattatacccctgatttgactcattatgaagttgaaaaggcattcaaaaaa
gccttcaaagtttggtctgatgtgacacctctgaattttatcagaattcaaaatggcact
gcggatatcatgatctcttttggaactaaagagcatggtgacttctacccatttgatgga
ccctctggtctattggctcacgcttttcctcctggaccaaattatggaggagatgcccat
tttgatgatgatgaaacctggacaagtagttccaaaggttacaatttgtttcttgttgct
gcccatgagtttggccattccttaggtcttgaccactccaaggacccaggggcactcatg
tttcccatatatacctacactggcaaaagccactttatacttcctgatgatgatgtacaa
gggatccagtctctctatggtccaggagatgaagaccccaaccctaaacatcccaaaacg
ccagacaaatgtgatccttccttatcccttgatgccattaccagtctccgaggagaaaca
atgatctttaaagacagattcttctggcgtctgcatcctcagcaggttgacgcagagctg
tttttaacaaaatccttttggccagaacttcccaaccgtattgatgctgcatatgagcac
ccttcccatgaccttatcttcatctttagaggcagaaaattttgggctcttaatggttat
gatattctggaaggttatcccagaaaaatatccgacctgggatttccaaaagaggttaaa
aagataagtgcggccgttcactttgaggatacagagaagacgctcttcttctcaggaaac
caagtctggagctatgatgaaactaaccatatgatgcataaagactaccccagactaata
gaagaggacttcccaggaattggtgataaagtagatgctgtcttcgagaaaaatggttat
atctattttttcaatgggcccatacagtttgaatacagcatctggagtaaccgtattgtt
cgtgtcatgccaacaaattccctattgtggtgttaa
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