Orcinus orca (killer whale): 101271022
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Entry
101271022 CDS
T05247
Symbol
NECTIN2
Name
(RefSeq) nectin-2 isoform X2
KO
K06531
poliovirus receptor-related protein 2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03266
Virion - Herpesvirus
oor04514
Cell adhesion molecule (CAM) interaction
oor04517
IgSF CAM signaling
oor04520
Adherens junction
oor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
101271022 (NECTIN2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101271022 (NECTIN2)
04517 IgSF CAM signaling
101271022 (NECTIN2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101271022 (NECTIN2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101271022 (NECTIN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101271022 (NECTIN2)
04090 CD molecules [BR:
oor04090
]
101271022 (NECTIN2)
Cell adhesion molecules [BR:
oor04515
]
Immunoglobulin superfamily
Nectin family
101271022 (NECTIN2)
CD molecules [BR:
oor04090
]
Proteins
101271022 (NECTIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
101271022
NCBI-ProteinID:
XP_004271237
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Position
20:49008250..49036482
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AA seq
539 aa
AA seq
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MARDAALPPSKLSPLKLPLLPLLLLLLRETGAQDVRVRAAAEVRGQLGDTVELPCHLLPP
APEIRVSQVTWLRLDAPEGNQNVAIFHPQYGPSFPSPKPGKERLSFVNAGQSTGARQGTE
LEVRDATLALRGLTVEDEGNYTCEFATFPRGTSRGVTWLRVIAQPQNHAETQEVTLSLDP
VPVARCVSTGGRPPARVSWLSPLDGEARESQVSGPLPGTVTVTSRFTLVPLGQADGVKIT
CKVEHESFEEPVLLPVTLSVRYPPEVSISGYDDNWYVGRSEASLNCDVRSKPEPTGYDWS
TTSGVFPASAVAQGPKLIVHSVDRLFNTTFICTVTNAVGTGHAEQVVLVRETPNTAGAGA
TGGIIGGIIAAIIATAVAATGILICRQQRKEQRLQGAEEVEDLEGPPSYKPPTPEAKLEE
PDMPSQLFTLGASEHNPLKTPYFDASVSCAEQEMPRYHELPTLEERSGPLLLGATNLGSP
MLVPPGMPALETVSLDLEDEEEEEDYLDKINPIYDSLSYSSPSESYQGKGFVMSRAMYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggacgcagccctcccgccgtcgaaattgtcgccgctgaagctgcctctactg
ccattgctgctgctactgctccgggaaaccggagcccaggatgtgcgagttcgggctgca
gccgaggtgcggggccagctgggggacaccgtagagttgccgtgccacctgctgccccca
gcgcctgaaatccgagtgtcacaggtgacgtggctgcgcctggacgcgcctgagggtaac
cagaacgtggctatcttccacccccagtatggtcccagcttccccagcccgaagcctggc
aaggagcggctgtccttcgtcaatgccgggcagagcaccggggccaggcaaggcacagag
ctggaggtgcgggacgccacactggccctccgggggctgacggtggaggacgagggcaac
tacacctgcgagtttgccaccttcccccggggcaccagtcggggagtgacctggctcaga
gtcatagcccagccccagaaccatgccgaaacacaagaagtcacactcagtctggatcct
gtacccgtggcccgctgtgtctccacgggcggccggccacctgcccgagtctcctggctc
tcacccttggatggggaggccagagagagccaggtgtcaggacccctgcctggtacagtc
accgtcaccagccgcttcaccttggtacccttgggccaagcagatggtgtcaagatcacc
tgcaaagtggagcacgagagctttgaggagccagttctgctgcctgtgaccctctctgtg
cgctacccccctgaggtctccatatctggctatgatgacaactggtatgtcggccgtagt
gaggcctccctgaactgtgacgtccgcagcaagccagagcccacaggctacgactggagc
acgacttcaggcgtcttcccagcctcagcagtagcccagggccccaagctgatcgtccac
tcggtggaccggctcttcaacaccaccttcatctgcaccgtcaccaacgccgtgggcacg
ggccacgccgagcaggtggtcctagttcgagagacacccaacacagcaggcgcaggggcc
acaggtggcatcatcgggggcatcattgctgccatcatcgcgactgctgtggccgccaca
ggcatcctcatctgccgacagcagcggaaggagcagaggctgcagggggcagaggaggtg
gaggacctagaggggcctccctcatacaagccgccgactccagaggcaaagctggaggag
ccggacatgccctcccagctcttcaccctgggggcctcggagcacaacccgctcaagacc
ccctactttgatgctagtgtctcatgcgctgagcaggagatgcctcgataccatgagctt
cccaccttggaagaacggtcagggcccctgctcctgggggccacgaacctggggtccccc
atgctggtgcctccagggatgcctgctctggagacggtttccctggatctagaggacgag
gaggaggaggaagactatctggacaagatcaaccccatctacgattccctgtcctactcc
agcccctctgagtcctaccagggcaaaggctttgtcatgtcccgggccatgtatgtgtaa
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