KEGG   Orcinus orca (killer whale): 101277553
Entry
101277553         CDS       T05247                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04010  MAPK signaling pathway
oor04064  NF-kappa B signaling pathway
oor04120  Ubiquitin mediated proteolysis
oor04140  Autophagy - animal
oor04144  Endocytosis
oor04380  Osteoclast differentiation
oor04620  Toll-like receptor signaling pathway
oor04621  NOD-like receptor signaling pathway
oor04622  RIG-I-like receptor signaling pathway
oor04657  IL-17 signaling pathway
oor04722  Neurotrophin signaling pathway
oor04936  Alcoholic liver disease
oor05132  Salmonella infection
oor05133  Pertussis
oor05135  Yersinia infection
oor05140  Leishmaniasis
oor05142  Chagas disease
oor05145  Toxoplasmosis
oor05152  Tuberculosis
oor05160  Hepatitis C
oor05161  Hepatitis B
oor05162  Measles
oor05168  Herpes simplex virus 1 infection
oor05169  Epstein-Barr virus infection
oor05170  Human immunodeficiency virus 1 infection
oor05171  Coronavirus disease - COVID-19
oor05200  Pathways in cancer
oor05222  Small cell lung cancer
oor05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
oor05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101277553 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101277553 (TRAF6)
   04064 NF-kappa B signaling pathway
    101277553 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101277553 (TRAF6)
   04140 Autophagy - animal
    101277553 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101277553 (TRAF6)
   04621 NOD-like receptor signaling pathway
    101277553 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    101277553 (TRAF6)
   04657 IL-17 signaling pathway
    101277553 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    101277553 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101277553 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101277553 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    101277553 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101277553 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101277553 (TRAF6)
   05161 Hepatitis B
    101277553 (TRAF6)
   05160 Hepatitis C
    101277553 (TRAF6)
   05171 Coronavirus disease - COVID-19
    101277553 (TRAF6)
   05162 Measles
    101277553 (TRAF6)
   05168 Herpes simplex virus 1 infection
    101277553 (TRAF6)
   05169 Epstein-Barr virus infection
    101277553 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101277553 (TRAF6)
   05135 Yersinia infection
    101277553 (TRAF6)
   05133 Pertussis
    101277553 (TRAF6)
   05152 Tuberculosis
    101277553 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101277553 (TRAF6)
   05140 Leishmaniasis
    101277553 (TRAF6)
   05142 Chagas disease
    101277553 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101277553 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    101277553 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101277553 (TRAF6)
   04121 Ubiquitin system [BR:oor04121]
    101277553 (TRAF6)
Enzymes [BR:oor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101277553 (TRAF6)
Membrane trafficking [BR:oor04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    101277553 (TRAF6)
Ubiquitin system [BR:oor04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    101277553 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 Sina_ZnF SlyX TRAF3_RING RING_XB3-XBAT31 Spc29 DUF3450 DUF4455 U-box zf-RING_11 PspA_IM30 AAA_13 DUF16 Myosin_tail_1 DUF7310 PUMA_CC CENP-F_leu_zip ATG16 Med21 EzrA HMMR_N DUF7607 UPF0242 Laminin_II Hydro_N_hd DUF1664 DUF948 TMF_DNA_bd
Other DBs
NCBI-GeneID: 101277553
NCBI-ProteinID: XP_004264064
LinkDB
Position
8:22293443..22321485
AA seq 561 aa
MLLKIFLRRRKRAVDNHLTMSLLHWENSCGSSQSESDCCAAMAASSCGAAAKDDSVSGTA
STVNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRD
AGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHRAHCEFALM
NCPQCQRPFQKCQLNIHIVKECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNT
MLIREQMPNHYDLDCPTAPVPCTFSTFGCHEKMQRNHLARHLQEDTQSHMRMMAQAVQTL
SLAIAPAPQRGMLPCDSASLPRISSGCHSEVQNFQETIQQLEGRLVRQDHQIRELTAKME
TQSAYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFY
TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAP
VRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVST
RFDMGSLRREGFQPRSTDLGI
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgctactcaaaatctttttgagaagaagaaaaagagcagtcgataatcaccttactatg
agtctgctacactgggaaaacagctgtggatccagccagtctgagagcgactgctgtgct
gccatggccgccagctcctgtggtgctgcagcaaaagatgacagtgtgagtggaactgcc
agcacagtgaatctttccagctcttttatggaagagatccagggatatgacgtggaattt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcattacgggaagca
gtgcaaacaccatgcggccacaggttctgcaaagcctgcatcatcaaatcaataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttcctgac
aattttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtctg
cacaagatggaactgaggcatcttgaggatcatcgagcacattgtgagtttgctcttatg
aattgtccccaatgccaacgtcccttccaaaaatgccaacttaatattcacattgtcaag
gagtgtccaaggagacaggtttcttgtgtaaactgtgctgtatcgatggcatttgaagat
aaagagattcatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaacacc
atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccagtt
ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc
cacctgcaagaggatacccagtcgcacatgagaatgatggcccaggctgttcagacttta
agccttgcaatagctcccgcacctcagcgtggcatgctgccatgtgattctgcctctctg
ccccggatttcctctgggtgtcactcagaggtccagaatttccaagaaaccattcaacag
ttagagggtcgccttgtaagacaagaccatcaaatccgggagctgactgcaaaaatggaa
actcagagcgcgtatgtaagtgagctaaaacgaactattcgaacccttgaggacaaagtt
gctgaaatagaagcacagcagtgcaatggaatatacatctggaagattggcaattttggg
atgcacttgaaatctcaagaagaggagaaacctgttgtcattcacagccccggattctat
acaggcaaacccggctacaaactatgcatgcgcctgcacctgcagctaccaactgcacag
cgctgtgccaactacatatccctctttgtccacacgatgcaaggagagtatgacagccac
ctcccttggcccttccagggtactatacgccttaccatccttgatcagtctgaagcacct
gtaaggcaaaaccatgaagagataatggacgccaaaccagagctgcttgccttccagaga
cccacaatcccacggaaccccaaagggtttggctatgtgacctttatgcatctggaagcc
ctaagacaaagaaccttcatcaaggacgacacgttattagtacgctgtgaggtctccacc
cgctttgacatgggcagtcttcggagggagggttttcaaccacgaagtactgacttgggg
atatag

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