Orcinus orca (killer whale): 101280074
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Entry
101280074 CDS
T05247
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04064
NF-kappa B signaling pathway
oor04217
Necroptosis
oor04621
NOD-like receptor signaling pathway
oor04657
IL-17 signaling pathway
oor04668
TNF signaling pathway
oor05163
Human cytomegalovirus infection
oor05168
Herpes simplex virus 1 infection
oor05169
Epstein-Barr virus infection
oor05170
Human immunodeficiency virus 1 infection
oor05200
Pathways in cancer
oor05203
Viral carcinogenesis
oor05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101280074 (TRAF5)
04668 TNF signaling pathway
101280074 (TRAF5)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101280074 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101280074 (TRAF5)
04657 IL-17 signaling pathway
101280074 (TRAF5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101280074 (TRAF5)
05203 Viral carcinogenesis
101280074 (TRAF5)
09162 Cancer: specific types
05222 Small cell lung cancer
101280074 (TRAF5)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101280074 (TRAF5)
05168 Herpes simplex virus 1 infection
101280074 (TRAF5)
05163 Human cytomegalovirus infection
101280074 (TRAF5)
05169 Epstein-Barr virus infection
101280074 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101280074 (TRAF5)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
101280074 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-TRAF_2
zf-C3HC4_4
DUF4941
RING_XB3-XBAT31
zf-RING_6
zf-RING_UBOX
zf-RING_2
Sina_ZnF
DUF4279
ATG16
Motif
Other DBs
NCBI-GeneID:
101280074
NCBI-ProteinID:
XP_004275332
LinkDB
All DBs
Position
1:40830754..40880561
Genome browser
AA seq
558 aa
AA seq
DB search
MACSEEQGGVPCGFIRQNSGNSTSLDFEPDAEYQFVEQLEERYRCAFCRSVLHNPHQTGC
GHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNCCRREVLNLYVFCKNAPGCNAKV
ILGRYQDHLQHCLFQAVQCSNESCREPVLRKDLKEHLSADCPFREEKCLYCKKDVAVINL
QNHEENLCPEYPVSCPNKCLQIIPRTEVDEHLAVCPEAEQDCPFKHYGCTVKDKRGNLQE
HEHSALRDHMLLVLEKNFQLEEQISDLYKSLEQKESKIQQLAETVKKFEKEFKQFAQLFG
KNGTFLSNIQVLASHIDKSAWLEVQVRQLLQMANQQQSKFDLRPLVEAIDTVKQKITLLE
THDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDYKLKKKEA
LDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKRNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK
DDTLFLKVAVDLTDLEDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttctgaggagcaaggaggtgtcccctgtggcttcatccgccagaattctggt
aactccacgtctttggactttgagccagatgcagagtaccagtttgtggagcagctggaa
gagcgctacagatgtgccttctgccgctcagtgcttcacaacccccaccagacgggctgt
gggcaccgcttctgccagcactgcatcctgtccctgagagaattaaacgcagtcccactc
tgccctgtagataaggaggtgatcaaatctcaggaggtgtttaaagacaattgctgcaga
agagaggtcctcaatttatatgtattttgcaaaaatgctcctggatgtaatgccaaggtt
attctgggacgataccaggaccaccttcagcactgcttattccaagctgtgcagtgctct
aatgagagctgtcgggagccagtccttcgcaaagatctgaaagagcatttgagcgcagac
tgtccgtttcgagaggaaaaatgcctttattgcaaaaaggatgtggcagtcatcaatcta
cagaatcatgaggaaaacttgtgtcctgagtacccagtatcttgtcccaacaagtgtttg
cagattattccaagaactgaggtggatgaacaccttgctgtgtgtcctgaagctgaacaa
gactgtcctttcaagcactatggctgtactgtaaaggataaacgaggaaacctgcaggag
catgagcattcagccttacgggaccacatgcttctggttttagaaaagaacttccagtta
gaagaacagatttctgacttatataagagcctagaacagaaagaaagtaaaatccagcag
ctagcagaaactgtaaagaaattcgaaaaggagttcaagcagtttgcacagttgtttggc
aaaaatggaactttcctctcaaatatacaggttcttgccagtcacattgacaagtccgct
tggctagaagttcaggtgcgtcagttattacaaatggctaaccagcaacaaagtaaattt
gatctgaggcctttggtggaagcgattgatacagtgaaacagaaaatcaccctgctagaa
acccatgatcaaagattagttgttttggaaggggagactaacaaacatgatgcccacatt
aatatccataaagcacagctgaataaaaacgaagagcgatttaagctgctagaaagtgcc
tgctataacggaaagctcatctggaaggtcacagactacaagctgaagaagaaggaggcg
ctggacggacacacagtatccatcttcagccagcccttctacaccagccggtgtggctac
aggctctgcgctagagcgtacctgaatggggacgggtccgggaaggggacgcacctgtcg
ttgtactttgtggtgatgcgaggggagtttgactcactgttgcagtggccattcaggcag
agggtgaccctgatgcttttggaccaaagtggcaaaaggaaccacattatggagaccttc
aaggctgaccccaatagcagcagctttaaaagacccgatggggagatgaacattgcctct
ggctgtccacgcttcgtggctcattccactttggagaatgccaagaacacctacattaaa
gatgacaccctgttcttgaaagtggctgtggatctaactgacctggaggatctctaa
DBGET
integrated database retrieval system
