Orcinus orca (killer whale): 101280303
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Entry
101280303 CDS
T05247
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X4
KO
K02084
apoptotic protease-activating factor
Organism
oor
Orcinus orca (killer whale)
Pathway
oor01524
Platinum drug resistance
oor04115
p53 signaling pathway
oor04210
Apoptosis
oor04215
Apoptosis - multiple species
oor05010
Alzheimer disease
oor05012
Parkinson disease
oor05014
Amyotrophic lateral sclerosis
oor05016
Huntington disease
oor05020
Prion disease
oor05022
Pathways of neurodegeneration - multiple diseases
oor05134
Legionellosis
oor05152
Tuberculosis
oor05160
Hepatitis C
oor05161
Hepatitis B
oor05162
Measles
oor05164
Influenza A
oor05168
Herpes simplex virus 1 infection
oor05169
Epstein-Barr virus infection
oor05200
Pathways in cancer
oor05222
Small cell lung cancer
oor05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101280303 (APAF1)
04215 Apoptosis - multiple species
101280303 (APAF1)
04115 p53 signaling pathway
101280303 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101280303 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
101280303 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
101280303 (APAF1)
05160 Hepatitis C
101280303 (APAF1)
05164 Influenza A
101280303 (APAF1)
05162 Measles
101280303 (APAF1)
05168 Herpes simplex virus 1 infection
101280303 (APAF1)
05169 Epstein-Barr virus infection
101280303 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
101280303 (APAF1)
05152 Tuberculosis
101280303 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
101280303 (APAF1)
05012 Parkinson disease
101280303 (APAF1)
05014 Amyotrophic lateral sclerosis
101280303 (APAF1)
05016 Huntington disease
101280303 (APAF1)
05020 Prion disease
101280303 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
101280303 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101280303 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
101280303 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
NB-ARC
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
CARD
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_NUP159_NUP214
WD40_like
WD40_RFWD3
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Ge1_WD40
CARD_2
PEP5_VPS11_N
Utp8_b_propeller
Beta-prop_Nup120_160
AAA_16
ATPase_2
AAA_22
AAA_18
NPHP3_N
Hira
Motif
Other DBs
NCBI-GeneID:
101280303
NCBI-ProteinID:
XP_004269550
LinkDB
All DBs
Position
11:80389994..80482387
Genome browser
AA seq
1248 aa
AA seq
DB search
MDAKARNCLLQHREALERDVKTSYIMDHMISDGVLTVSEEEKVKNEPTQRQRAAMLIKTI
LEKDNYSYISFYNALLHEGYKDLADLLHRGIPVISSSNGKDSVGITSYVRTVLCEGGVPQ
RPVVFVTRRKLVNAIQQKLFKLSGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEVCFPGG
VHWVSVGKQDKSGLLMKLQNLCTRLDQDENFSQRLPLNIEEAKDRLRILMLRKHPRSLLI
LDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVNM
KKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKKIKKSSSYDY
EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVNK
SLLFCDRNGKSFLYYLHDLQVDFLTQKNHSQLQDLHKKLITQFQRHFWLHCLSPDQEDCM
YWYNFLAYHMASAKMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHMLDEKDGTVC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYQQAKLKAKQEVDNGMLYVEWINKE
NIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKNLQVFKAETGEKLLEIKAHEDEVL
CCAFSADDRFIATCSVDKKVKIWNSMSGELVHTYDEHSEQVNCCHFTNNSNHLLLATGSN
DCFLKLWALNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSI
NVKQFFLNSEEPHEDMEVIVKCCSWSADGARIMVAAKNKVFLFDIHTSGLLAEIHTGHQS
TVQYCDFSPHNHLAVVALPQYCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSS
DDQTIRLWETKKVCKNSAIALKQEIDVVFQENEVMVLAVDDIKRLQLINGNTGQIDYLTE
AQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRIGHKNTVRHIQFTADAKTLISS
SDDSAIQVWNWQSEEYVFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDF
VCHQDTVLSCDISPDATKYSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSAFSVDSSL
LATGDDNGEIRIWNVSNGELLHLFAPISVEEGAATHGGWVTDLCFSPDSKMLVSAGGYLK
WWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagccctggaaagggacgtc
aaaacatcctacatcatggatcacatgattagtgatggagttttaacagtgtcggaggag
gaaaaagtaaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaacgata
cttgaaaaagataattattcctatatatcattctacaatgctctgctacatgaagggtat
aaagatcttgccgaccttctccatcgtggcattcctgtcatatcttcttccaatggcaaa
gattcagttggaataacttcatatgtaaggacagtcctgtgtgaaggtggcgtaccacag
aggcccgttgtttttgttactaggaggaagctagtgaatgcaattcagcagaagctcttc
aaactgagtggtgaaccgggatgggtcaccatatatggaatggcaggttgtgggaagtct
gtattagctgcagaagctgttcgagatcattctttcttagaagtttgtttcccagggggt
gtgcattgggtttcagttgggaaacaagacaaatctgggcttctgatgaaactgcagaat
ctttgcacacggttggatcaggatgagaatttctcccagaggcttccacttaatattgaa
gaagctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctctgttgatt
ttggatgatgtttgggatccttgggtgttaaaagcttttgacaatcagtgtcagattctt
cttacaaccagagacaagagcgttacagattcagtaatgggtcctaaatatgtagtccct
gtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaatatg
aagaaagcagatttgccagaacaagctcacagtattataaaagaatgtaaaggttcacct
cttgtagtgtctttaattggtgcacttttacgagattttcccaaccgctgggagtactac
ctcagacaacttcagaataagcaatttaagaagataaagaaatcttcatcttatgattat
gaggctttggatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaagat
tattacacagatctttccatccttcagaaagatgttaaggtgcctacgaaggtgttgtgt
atcctctgggatatggaaactgaagaagttgaagacatactgcaggagtttgttaataag
tctctcttgttctgtgatcgaaatggaaaatcatttctttattatttacatgatcttcaa
gtagatttcctcacacagaagaatcacagccagcttcaggatctacacaagaaactaatc
actcagttccagagacatttctggctacattgtctttcaccggatcaggaggactgcatg
tattggtacaattttctggcctatcacatggctagtgctaaaatgcacaaagaactgtgt
gctttaatgttttccctggattggattaaagcaaaaacggagctcgtaggccctgctcat
ctgattcatgaatttgtggaatacaggcatatgttggatgaaaaggatggtacagtctgt
gagaatttccaggagtttttatctttaaatggacatcttcttggacgacagccatttcct
aatattgtacaactgggcctctgtgaactggaaacttcagaagtttatcagcaagctaag
ctgaaggccaagcaggaggtcgataacggaatgctttacgtggaatggataaacaaagaa
aacatcaagaatctctcccgcttggtcgtccgcccccatacagatgctgtgtaccatgct
tgcttttctgaggatggtcaaagaatagcttcttgtggagctgataaaaacctgcaggtt
ttcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtgctt
tgctgtgcattttctgcagatgacagatttatagcaacctgctcagtggataaaaaagtg
aagatttggaattctatgtctggggaactagtacatacctatgacgagcactcagagcaa
gtcaattgctgccacttcaccaacaatagtaatcacctgctcttagccactggttcaaat
gactgcttcctcaaactctgggctctgaatcaaaaagaatgtcgaaataccatgtttggc
catacaaattcagtcaatcactgcaggttttcaccagatgataagcttttggctagttgt
tcagctgatggaacattaaagctttgggatgtgaaatcagcaaacgagaggaagagcatt
aatgtgaagcagttcttcctaaattcagaggagcctcatgaggatatggaagtgatagtg
aaatgctgttcatggtctgctgatggtgctaggataatggtggcagcaaaaaataaagtc
tttctgtttgacattcacaccagtggcctgttggcagaaatccacacaggccatcagagc
actgtccagtactgtgacttctccccccataaccatctggcagtggtggctttgccccag
tactgcgtggagttgtggaatatggactcatgtttaaaagtagctgattgtagaggacat
ttaagttgggtccattgtgtgatgttttctcctgatggatcatcatttttgacgtcttct
gatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgctatagcg
ttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgatggttcttgcagttgat
gatataaaacgtctgcaactcattaatggaaacacaggtcagattgattatctgactgaa
gctcaagtgagttgctgttgcttaagtccacatcttcagtaccttgcatttggaggtgaa
gatggagccattcagattttagaactcctaaacaacagaatcttccaatccaggattggg
cacaagaacactgtacggcacatccagttcacagctgatgcaaagactcttatctcaagc
tctgatgactctgcaattcaggtatggaattggcaatcagaggaatatgtctttctgcaa
gcccatcaggaaactgtgaaagactttagactcttgaaaaattcaagactgctttcctgg
tcgtttgatggaacagtgaaggtatggaatattattactggaagaatagaaaaagacttt
gtctgtcatcaggatacagttctttcttgtgatatttctcctgatgcaaccaagtattct
tctacctctgctgacaagactgcaaagatttggagttttgagctcctttcccctcttcat
gaattgagaggccacaaaggctgcgtgcgctgctctgccttctctgtggacagtagcctg
ttggcaactggagatgacaacggagaaatcaggatatggaatgtctcaaatggtgagctt
cttcatttgtttgctccgatttcagtagaagaaggagctgctactcacggaggctgggtg
actgacctttgcttttctccagatagcaaaatgcttgtttctgctggaggatatcttaag
tggtggaatgttgtcactggggaatcctcacagaccttctacacaaatggaaccaatctt
aagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggtatt
ttatatattttaaagattttagagtaa
DBGET
integrated database retrieval system
