Orcinus orca (killer whale): 101280862
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Entry
101280862 CDS
T05247
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X3
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor02010
ABC transporters
oor04146
Peroxisome
oor04977
Vitamin digestion and absorption
oor04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101280862 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101280862 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
101280862 (ABCD4)
04980 Cobalamin transport and metabolism
101280862 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101280862 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101280862 (ABCD4)
Enzymes [BR:
oor01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
101280862 (ABCD4)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101280862 (ABCD4)
Transporters [BR:
oor02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
101280862 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
SbmA_BacA
AAA_22
AAA_29
AAA_23
IRK
nSTAND3
NACHT
AAA_25
AAA_7
T2SSE
HerA_C
CoV_E
Motif
Other DBs
NCBI-GeneID:
101280862
NCBI-ProteinID:
XP_012387098
LinkDB
All DBs
Position
2:complement(173551930..173576760)
Genome browser
AA seq
606 aa
AA seq
DB search
MAVRGPAPRASARPRLDLQFFQRFLQIQKVLFPSWSSQNALMFLTLLCVALLEQLVIYRV
GLIPSQYFGVLGNKDLNGFKTLTFLAVVLIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLH
RLYFRGRVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSVASKLIVSPFTLIYYTYQCFQ
STGWLGPVSIFGYFILGTVVNKMLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFFR
AGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGVNMFDYLGSILSYVVISIPIFSGVYRD
LSPTELSTLVSKNAFVCMYLISCFTQLIDLSTTLSDVAGYTHRIGELQETLLDMTLKSRD
GEILDESEWDLARTPGWPATERTDTAFLLERVCISAPSSNKPLIKDLSLKISEGQSLLIT
GNTGTGKTSLLRVLGGLWASTGGSVQMLMDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSADDERIMRFLELAGLSSLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRIGQQLGMTFVSVGHRRSLEKFHSLVLKLCGEGRWEL
TRIKVE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccgggggcccgcgccccgggctagcgcccggcccaggttagatctgcaattt
ttccagcggttcctgcagatacagaaggttttgtttccctcttggtcatcacagaatgcc
ttgatgttcctgactcttttgtgtgtggccctactggaacaactggtgatctaccgggtt
ggcttgattcccagtcagtactttggggtcctaggaaacaaagatttaaatgggtttaag
acgctgacgttcctggctgttgtgctcatcgtcctcaactccatgctgaagagctttgac
cagttcacctgcaacctgctgtatgtgagctggaggaaggacctcaccgagcacctccac
cgcctctacttccggggccgcgtgtactacaccctcaacgtgctgcgggatgacatcgat
aacccggaccagcgcatcagccaggacgtggagcggttctgccggcagctcagcagcgtg
gccagcaagctgatcgtctcccccttcaccctcatctactacacctatcagtgcttccag
agcaccggctggctcgggcctgtgagcatctttgggtatttcattctgggaaccgtggtg
aacaagatgttgatgggtcccattgtggcaaaactggtgcagcaggagaagctggagggg
gatttcaggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcaga
gctgggcacgtggagcacatgaggacagaccgcaggctgcagagactccttcagacccag
agggagctgatgtccaaggagctctggctgtacatcggcgtcaacatgtttgactatctg
ggcagcatcctgagttacgtcgtgatctcaatccccattttcagcggcgtctacagagac
ctgagccccacagagctcagcaccctggtcagcaagaacgcctttgtatgcatgtacctc
atcagctgcttcacccagctcatcgatctctccaccacgctctccgatgtggcaggctac
acacacaggatcggggaacttcaggagaccctgctggacatgaccctgaagtcacgggat
ggggagatcctggacgagagcgagtgggacttggccaggactccaggatggccagcaaca
gagcgaacagatacagcttttcttcttgagcgggtctgcatctctgccccctcctctaac
aaacccttaatcaaggatctgagcctgaagatctctgaggggcagagcttgcttatcaca
ggcaacacgggcaccggcaagacctccttgctccgggttctgggtggcctctgggcgagc
acagggggctcagtgcagatgctgatggactttggaccccacggggtgctgttcctgcca
caaaagccattcttcactgacgggacccttcgggagcaggtgatatatcccttgaaggag
atctacccggactcaggttctgctgatgatgagaggatcatgaggttcctggagttggca
ggcctgtccagcttggtggcaaggacagagggtctggaccagcaggtcgattggaactgg
tacgatgttctgtccccaggagagatgcagaggctctcctttgcccggctcttctacctg
cagccgaagtatgcagtgcttgatgaagccaccagtgccctgaccgaggaggtggagagc
gagctctaccgcatcggccagcagctgggcatgacgttcgtcagcgtgggccatcggcgc
agccttgagaagtttcactccttggttctgaaactctgtggagaaggaaggtgggagctg
accagaatcaaagtggaatga
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