Orcinus orca (killer whale): 101280918
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Entry
101280918 CDS
T05247
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04140
Autophagy - animal
oor05014
Amyotrophic lateral sclerosis
oor05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101280918 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101280918 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
101280918 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101280918 (C9orf72)
Membrane trafficking [BR:
oor04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
101280918 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
101280918
NCBI-ProteinID:
XP_004275112
LinkDB
All DBs
Position
6:45521421..45554499
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQLLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELAAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtccaccaccttctccagctgttgccaagacagagattgctttaagt
ggtgaatcccctttattagcagcaacctttgcttactgggacaatattcttggtcctaga
gtaaggcacatctgggctccaaagacagaacagttacttctaagcgatggagaaataact
tttcttgccaaccataccctcaatggagaaatccttcgaaatgcagagagtggggcgata
gacgtaaagttttttgtcttgtctgaaaaaggagtaattattgtgtcattaatcttcgat
ggaaactggaatggggataggagcacctatggactatcaattatacttccccagacggag
ctgagtttctatctcccacttcacagagtgtgtgtggatagattaacacacattatccgg
aagggaaggatatggatgcacaaggaaaggcaagaaaatgtccagaagatcgtcttggaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggagaggta
attcctgtcatggaactgctctcatctatgaaatcccacagtgtccctgaagaaatagat
atagctgatacagttctcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcccacttgcagacgtgtggctgttctgttgtagtaggtagcagt
gcggagaaagtaaataagatagtaagaacattatgcctttttctgactccagcagagaga
aaatgctccagattatgtgaagcagaatcatcatttaaatacgagtcagggctctttgta
caaggcctactaaaggattcaactggaagctttgtgcttcccttccggcaagtcatgtac
gcgccctatcccaccacacacatagatgtggacgtcaacaccgtcaagcagatgccaccc
tgtcacgaacatatttataatcagcgtagatacatgagatcagagctggcagcattctgg
agagccacttcagaagaagacatggctcaggataccatcatctacacggacgaaagcttc
actcctgatttgaatatttttcaagatgtcttacacagagacactctagtaaaagccttc
ctggatcaggtctttcatttgaaacccggtctatctctcaggagtactttccttgcacag
tttctgctcgtccttcacagaaaagccttgacactaataaaatatatagaagatgatacg
cagaaggggaaaaagccctttaaatcgcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaaaattaaaccaggcctccat
tcctttatctttggaagacctttttatactagtgtccaagaacgagatgttctaatgact
ttttaa
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