Orcinus orca (killer whale): 101281415
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Entry
101281415 CDS
T05247
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101281415 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101281415 (LIG4)
Enzymes [BR:
oor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101281415 (LIG4)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101281415 (LIG4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101281415
NCBI-ProteinID:
XP_004273658
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All DBs
Position
18:4008256..4016887
Genome browser
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIANNNSAQRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFTQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLASIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNAFKTDVQNCILDGEMMAYNPDTQTFMQKGSKFDIKRMVEDSDL
HTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSGMYKTGCTLRFPRIENIRENKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKTKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTNSHPKPNLENRIAEFGGYVVQNPGPDTYCVIAGCENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDRYGDSYFVDTDWNQLKEVFSG
IKNAGEQTPGEMDPVIADLEHRYSWDNTPLSMFRHHTVFLDLYTVINDLSTKIEGARLAV
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
RELQEENQYLL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgcaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaacgatgcttgctaagctttatattgagttgcttaacttacct
cgaggaggaaaagatgccctcaaacttctaaactacagaacacctactggaactcgtgga
gatgctggagactttgcgatgattgcatactttgtgttgaaacccagatgtttacagaag
ggaagtttaaccatacagcaagtaaatgaccttttagactccattgccaacaataattct
gcccaaaggaaggacctagtaaagaagagtcttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttactcag
caaactgtgttttctgtctttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttggactcagcgacatttctatc
actttattctctgcatttaaacccatgctggcctctatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggtgagcgtatgcag
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggctcttccccacaggaaggttccctgacaccgttcatccataatgcattcaaa
acagatgttcaaaactgcatcctcgatggtgagatgatggcctataaccctgatacacaa
acttttatgcaaaaggggagtaagtttgatattaaaagaatggtagaagattctgatctg
cacacttgttactgtgtttttgatgtattgatggttaatgataaaaagctaggacaggag
acactgagaaagaggtatgaaattcttaatagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaggggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttgaaaattaaaccagagtatgtaaacgggctgatggat
gaactggacatcttaatcgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaaccccctcctggtgaaaaaccatcagtgttt
catactctctgtcgcgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggcccaacactggaagccttttcataagaaagccccacccagttgcattttgtgt
ggaacagagaagccagaggtctacatcgagccttggaactcggtcatcgttcaggttaag
gccacagagattgtccccagtggcatgtataaaactggctgcacgttgcgtttcccacga
attgagaacataagagaaaacaaagaatggcacgaatgtacatctctggaggacttagaa
caactccgagggaaagcctccggaaagcttgcgtctaaacacctttatgtgggtgacgat
gatgaaccacaagaaaaaaagcggaaggctgccccaaagacgaagaaagttattgggatt
attgagcacctcaaagcacccaacctttctaacgtaaacaaagtctctaatatatttgaa
gatgtggagttttgtgtcatgagtggaaccaacagccatccaaagcccaatctggagaac
agaatcgcagaatttggtggttacgtagtccaaaatccaggcccagacacatactgtgtg
atcgcagggtgtgagaacattagagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagcccgagtggctgttagagtgtttagagaccaaaagctgtgtgccatggcagcct
cgcttcatgattcacatgtgcccgtcaacaaaacagcactttgctcgggaatacgaccgc
tacggggatagttactttgtcgatacagattggaaccaactgaaggaagtgttctcggga
attaaaaatgctggtgaacagactcctggggaaatggatcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccgtttttttg
gacttgtatactgttattaatgacttaagcactaaaatcgagggggcaagattagctgtc
acagccctggagcttcaatttcatggagcaaaagtagtttcatgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agggaattacaggaggaaaatcaatatttgctttga
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