Orcinus orca (killer whale): 101289555
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Entry
101289555 CDS
T05247
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X5
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101289555 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101289555 (TDG)
Enzymes [BR:
oor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
101289555 (TDG)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101289555 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CDC27
Motif
Other DBs
NCBI-GeneID:
101289555
NCBI-ProteinID:
XP_004269494
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All DBs
Position
11:85106809..85153086
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AA seq
404 aa
AA seq
DB search
MEAENAGSCPLQHAQAFYTFPFQQMMAEVPMAVMNEQEMPEVPAPAPAQEPTQETPKGRK
RKPRKTEPKTPVEPKKPAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLP
GKYGIGFTNMVERTTPGSKDLSSKEVREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEV
FGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
ERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCENPCGSEPCSFSSDG
LTDSGGSTFSDIPNGQWMTQSFTDQIPSFNNHCGMQEQEEGNHA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcaggcagctgtccccttcagcacgcgcaagctttttatacattt
ccattccaacaaatgatggctgaagttcctatggcagttatgaatgaacaagaaatgccg
gaagttccagccccagctcctgctcaggaacccacacaagagactccaaaaggaaggaaa
agaaaacccagaaaaacagaaccaaaaacaccggtggaacccaaaaaacccgctgaagcc
aaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagacacattt
aaagtgaaaagaaaagtagaccggttcaatggtgtttcagaagctgaacttttgacgaag
actctaccggacattttgaccttcaatctggacattgtgattattggcataaacccagga
ctaatggctgcttacaaagggcatcattaccctggacctggaaaccatttttggaagtgt
ctgttcatgtcagggctgagtgaggtccaactgaatcacatggacgatcacactttacca
ggaaaatatggtattggatttaccaatatggtggaaaggacaacaccaggcagcaaggat
ctttccagtaaagaagttcgtgaaggaggacgtattctagtgcagaaattacagaaatat
cagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaggaagtt
tttggagtaaaagttaagaacttagaatttggacttcaaccgcataagataccagacaca
gaaacgctctgctatgttatgccatcgtccagtgcaagatgtgctcagtttcctcgagcc
caggacaaagttcattactacattaagctgaaagacttaagagatcagttgaaaggcatt
gagcgaaacacagacgtccaagaggtgcaatatacatttgacctgcagctagcccaagag
gatgcaaagaagatggctgtgaaggaagaaaagtatgatccgggttatgaagcagcgtac
ggtggtgcttattgtgaaaatccgtgcggtagtgaaccttgcagcttctcttcagatggg
ctgactgacagtggaggatcaactttcagtgacattccaaatgggcagtggatgacccag
tcatttacagaccagattccttcctttaataatcactgtgggatgcaagaacaggaagaa
ggaaaccatgcttaa
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