Orcinus orca (killer whale): 105748547
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Entry
105748547 CDS
T05247
Name
(RefSeq) protocadherin gamma-C5 isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
105748547
Cell adhesion molecules [BR:
oor04515
]
Cadherins
Protocadherins
105748547
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
105748547
NCBI-ProteinID:
XP_004280284
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All DBs
Position
3:complement(67218380..67397476)
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AA seq
944 aa
AA seq
DB search
MGPKTPPQLAGKWQVLCMLSLCSWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKLTDLL
SRRLRLGSEESGHYFSLSLVSGALAVNQKIDRESLCGASTSCLLPLQVVTEHPLELIRVE
VEILDLNDNSPSFATPEREIRISESAALGALFPLDSAQDPDVGTNTVSFYTLSPSSHFSL
NVKTLKDGKLFPELVLEQQLDREAQASHQLVLTAVDGGIPPRSGTTLISITVLDVNDNAP
TFQSSVLRVGLPENAPVGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPSSG
AIRVLGPIDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVNPVL
ESTPVGIVVGLFNVRDRDSGRNGEVSLDISSGLPFQIKPSENHYSLLTSKPLDREATSHY
IIELLARDGGSPPLHAHLTVRLNISDVNDNAPCFTQQLYTAYIPENRPPGSLLCTVAASD
PDAGENARLTYFIVGNQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDAG
SPPLHANTSLHVFVLDQNDNAPAVLHPRPGRDLSVPQRLPRSAPPGSFVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDPDTQQVVVLVRDNGDPSLSSTA
TVLLILEDKDPEEMPKSSDFLTHPPEHSDLTLYLIVALVAVSLLSLVTFTFLSAKCLRGH
ADGDGGGGECCGRQDSPSREFYKQSGPNLQVSSDGTLKYMEVTLRPTDSHSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALSQEPDTFRSRSNTLRERSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGSAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggcccaagacacccccgcagctcgctgggaaatggcaagtgctgtgcatgttgtcc
ttgtgctcctggggctgggtgtctgggcagcttcgttactcagtggtggaggagtctgag
ccggggacgctggtggggaacgttgctcaggatctaggcttaaagctgacagatctgttg
agccgccggctgcggttgggctctgaggagagtgggcattatttttccctgagcttggtg
agtggtgctctggcagtgaatcagaaaattgaccgagagagcctgtgtggagccagcacc
agctgcctgctgccactacaggtggtgaccgaacacccgctggaactaatccgtgtagag
gtagaaatcctggatctcaatgacaactctcctagctttgccacccctgagcgagagata
cgcatctcagaatcagctgcacttggggcactgttcccactggatagtgcccaggatcca
gacgtgggtaccaataccgtgagcttctatactctgagccccagtagccacttctctctg
aatgtgaagaccctaaaagatgggaagctgttcccagagctggtgctagagcagcagctg
gaccgtgaagcccaggcaagccatcagctggtgctcactgctgtggatgggggtatccca
ccccgctcggggaccacccttatctccatcactgtgctggacgtcaatgataatgctcca
accttccagtcctcagttctacgtgtgggactcccagagaatgcgcccgtgggtacgctg
ctgctccgcctcaatgccactgatccagatgaaggcaccaatggccaactagactattct
tttggagaccatacatctgaggcagtgcggaatctctttggcctagaccctagcagtgga
gcaatccgtgtgttgggtcccatagactttgaggaatcaagtttctatgaaattcatgca
agagcccgtgaccaaggacagccagccatggaaggccactgtgtgattcaagtggatgtg
ggggatgcgaatgacaacgccccagaggtactgttggcctctttggtcaaccctgtcctg
gagagcacaccagtgggcatagtagtgggattatttaatgtgcgggaccgagactcaggg
agaaatggtgaagtgagccttgatatctcttctggcctgccatttcagattaagccttct
gagaaccactactcactgctaaccagcaaacctttggaccgtgaggccacatcccactat
atcattgagctgctggcccgcgatgggggctcacctcccttgcacgcccatctcaccgtc
aggctcaacatttcagatgtgaacgacaatgcaccctgcttcacccagcagctctacacg
gcttacatcccagaaaaccggcctccaggctcccttctctgcaccgtggctgcctctgat
ccagacgctggggaaaatgctcgcctcacctacttcattgtagggaatcagattcaggga
gccccagcctcctcctttgtgtatgtcaaccctgaggatgggcgggtgtttgcccagcgt
actttcgactacgaattgctgcagatgctgcagatcgtggtgggcgttcgagacgctggc
tctcccccgttgcatgccaacacatctctccatgtgtttgtcctggaccagaatgataat
gccccagccgtgctgcaccccagaccaggccgggatctctcagtcccccagcgtctccct
cgctctgcccctcctggctccttcgtcaccaaggtgacagccgtagatgctgatgcaggc
cacaacgcctggctctcctattcactgttgccacagtccacagccccaggactgttcctg
gtgtctgcacacactggtgaggtgcgaacagcccgggccttactggaggatgaccctgac
acccagcaggtggtggtcctggtgagggacaatggtgacccttcactctcctctacagcc
acagtgcttctgattctggaggataaggaccctgaggaaatgcccaaatccagcgacttc
ctcacacaccctcctgagcattcagaccttaccctttatctcattgtggctcttgtggcc
gtcagtctcttatccttagtcaccttcacctttctgtcagctaagtgccttcgggggcac
gcagacggggatgggggtgggggtgagtgctgtgggcgccaggactcgccctcccgggag
ttctataagcagtccggccccaacctacaggtgagctcagacggcacactcaagtacatg
gaggtgacgctgcggcccacagactcgcacagccattgctacaggacatgcttttcacca
gcctcggacggcagtgacttcacttttctaaggcccctcagcgtccagcagccctcagcg
ctgtcacaggagcctgacaccttccggtcccgctctaacacgctgcgggagcggagccag
caagccccgcccaacacggactggcgtttctcccaggcccagagacccggcaccagcgga
tcccaaaatggcgatgaaaccggcacctggcccaacaaccagtttgacacagagatgctg
caagccatgatcttggcctccgccagtgaagccgctgatgggagctccaccctgggaggg
agtgccggcaccatgggcttgagtgcccgctacggaccccagttcaccctgcagcacgtg
cccgactaccgccagaacgtctacatccccggcagcaatgccactctgaccaacgcagct
ggcaagcgagatggcaaggccccggcaggtggcaacggcaacaagaagaagtcgggcaag
aaggagaagaagtaa
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