Oratosquilla oratoria (Japanese mantis shrimp): 143033893
Help
Entry
143033893 CDS
T11268
Symbol
SmB
Name
(RefSeq) small ribonucleoprotein particle protein SmB
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143033893 (SmB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oot03019
]
143033893 (SmB)
03041 Spliceosome [BR:
oot03041
]
143033893 (SmB)
03032 DNA replication proteins [BR:
oot03032
]
143033893 (SmB)
Messenger RNA biogenesis [BR:
oot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
143033893 (SmB)
Spliceosome [BR:
oot03041
]
Complex A
U1 snRNP components
Sm proteins
143033893 (SmB)
U2 snRNP components
143033893 (SmB)
Complex B
U1 snRNP components
143033893 (SmB)
U4/U6.U5 tri-snRNP components
143033893 (SmB)
Complex C
U2 snRNP components
143033893 (SmB)
DNA replication proteins [BR:
oot03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
143033893 (SmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
UPF0425_C
Motif
Other DBs
NCBI-GeneID:
143033893
NCBI-ProteinID:
XP_076055628
LinkDB
All DBs
Position
16:36584272..36596628
Genome browser
AA seq
199 aa
AA seq
DB search
MTFSKNNKMLAHIGYRMKVTMQDSRTFIGIFKAFDKHMNVILADCEEFRRVRGKKSTGNK
EEKEEKRTMGLVLLRGETIVTMTVEGPPASEEGPRVNLPGAAPGPGLGRPAGRGMPAGGP
GAPAGLQGPVRGVGGPSQQMMQPAARAGPQINMPPRGGPPSSVPPHMMGGMPPHMGRGGP
MGPPSSPMMRGGPPSGRPY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgactttctccaagaacaacaaaatgctggcccatattgggtatcgcatgaaagttacc
atgcaggatagtaggacattcattggaattttcaaagcatttgacaagcacatgaatgtg
atccttgctgattgtgaggagttcagacgtgtgcgtggtaagaagagcacaggaaataaa
gaagagaaggaggagaagagaactatgggacttgtactcctgagaggagagacaattgtt
accatgacagtggaagggcctccagcaagtgaggaaggcccacgtgttaaccttccaggg
gcagctccagggccaggtttaggacgcccagctgggagaggtatgccagcaggtggccca
ggtgctccagctggtctccaggggccagtgcggggtgtgggtggaccctctcaacaaatg
atgcagccagcagctcgtgcaggaccacagataaacatgccacctcgaggaggacctccc
agtagtgttcctccacatatgatgggagggatgcctccacatatgggtagaggtggtcct
atgggtccaccttcaagtcctatgatgagaggaggaccaccctctggaagaccatattaa
DBGET
integrated database retrieval system
