Ogataea parapolymorpha: HPODL_02433
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Entry
HPODL_02433 CDS
T08137
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_02433
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
HPODL_02433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-rbx1
zf-RING_UBOX
ARM_TT21_C
YL1
ERCC3_RAD25_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
25771886
NCBI-ProteinID:
XP_013932212
UniProt:
W1Q789
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Position
VII:67635..69908
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AA seq
757 aa
AA seq
DB search
MRIEPGSSDDDGDEDFVPDDNDEDEEFVFDVKDEEEAEEVPESVKNEEDDEEIIVIEGTS
ATNGDGDQNTIDSDTPLAEVPKKRKRAPAGSKPKKKKNDGPKLTAHQRRTMKLYEFNPDV
AETFPQLSLLSRRPVEKAEHPEGMTITLLPFQLEGLAWMIKQEEGEYHGGILADEMGMGK
TIQMISLMMHDRSKRPTLVVAPTVALIQWKTEIENHAGGALKVGLFHGQSRAKSLEELEE
YDVVMTTYAVLESCYRKHKYGVKRNGRTVKEKSLLHSKHFYRVILDEAHNIKDRQSSTAR
AANNLSCDKRWCLSGTPLQNRIGELYSLIRFLDIAPFCEYFCTKCPCRSKEWIFPDNRNC
YFCGHHGMLHMNFFNHFMLKNIQKYGLQQEGEESFERIQLLLRQIMLRRTKVERADDLGL
PPKIVEIRRDYFNPEEKDLYQSLYSDSKRQFNDYVAQGVVLNNYANIFTLITRMRQLADH
PDLVLKRFKKAPKDLLNSGAIVCQLCDDEAEEPIESKCHHKFCRICITEYVESFNGDNKR
LECPVCHIGLSIDLEAPALEMNQEVVEKGSIVNRIDMGGEWKSSTKIEALMEELYKSRSD
RQTVKSIVFSQFTSMLDLVEWRLKRAGFSIAKLQGSMTPIQRDSVIQHFMTNPSVEVFLV
SLKAGGVALNLVEANQVFILDSWWNPALDTGQAADRIHRIGQHRPIRIVKLVIEDSIESR
IIELQQKKADMVKATLDQDQNAASRLSAADMQFLFNN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagagcctggctcaagcgacgatgatggcgatgaggatttcgttcccgacgac
aacgacgaggatgaggagtttgtgtttgacgtcaaggatgaagaagaggctgaggaggtg
cctgaatctgttaaaaacgaggaagacgacgaggagattattgttatcgagggcacgagt
gccaccaatggcgatggcgaccagaatacaatcgatagtgacaccccgttggcagaagtg
cccaaaaagcgaaaacgggcacctgcaggctcaaaaccgaaaaagaagaagaacgacggg
cccaagctcacggcccaccaacgacggacaatgaagctttacgagttcaacccagacgtg
gcagagacgttcccgcagctctccttactgagtcgaaggccggttgagaaggctgagcat
ccagagggcatgaccatcacgctgcttccgttccagctcgaaggtctggcttggatgatc
aagcaagaggagggcgaatatcacggtggcattcttgctgatgagatgggtatgggcaag
acgatccagatgatttcgttgatgatgcacgatcgcagtaagcgtccgacgctggttgtt
gcgccgacggtggccttgatccagtggaaaacggaaattgagaaccatgctggcggcgct
cttaaagtcgggcttttccacggacagagccgtgctaagtcgcttgaagagctggaggag
tacgacgttgtgatgaccacatatgcagtgcttgagtcgtgctaccggaagcacaagtat
ggcgtgaagcggaacggtagaacggttaaggagaaaagcctgcttcactcgaaacatttt
taccgggtcattctggacgaggcacataatatcaaggatcgtcagagctcgacggcgcgc
gctgcaaacaatttgagttgcgacaaacgatggtgtctttcgggcacgccgttgcagaac
aggatcggtgagctttattctctgatccggtttctggacattgccccgttctgcgaatat
ttctgtaccaagtgtccgtgtcgctcaaaagagtggatatttcccgacaacagaaactgc
tacttttgcggccaccacggcatgctccacatgaatttcttcaaccacttcatgctgaaa
aatatccagaaatatggtctgcagcaagagggtgaagagtcgtttgagcggatccagtta
cttcttcgccagatcatgctcagaagaacgaaagtggagcgggccgacgatctgggactg
cctccaaaaatcgtcgagattcgacgcgactatttcaacccagaagagaaggacctctac
cagtcgctatactcagactcgaaacggcagttcaacgactacgttgcacaaggtgtggtt
ctgaacaactatgccaacatctttaccctaatcacgcggatgagacagcttgcggatcat
ccggatctagttctcaagcgattcaagaaagcacccaaggatcttctcaacagcggtgcc
attgtctgccagctgtgtgatgacgaagcagaggagccgatagagtccaagtgtcaccac
aagttttgccggatctgtatcacagagtacgtggagtcgttcaacggcgacaataagcgt
ctcgagtgtccggtgtgccacattgggttgagtattgatctggaggcgcctgcgctggag
atgaaccaggaggtcgttgagaagggctctattgtgaatagaattgacatgggaggcgaa
tggaagtcttccactaaaattgaggccttgatggaagagttgtacaagtcccgttccgac
agacaaacagttaaaagcattgtcttttcgcagttcacgtccatgctggacctggtggag
tggcggctcaaaagggcgggcttttctattgcgaaattgcagggatccatgacccccatc
cagcgtgactctgtgatccagcactttatgaccaacccgtcggtggaggtgtttttggtg
tctttgaaggccggaggcgttgctctgaatcttgtcgaggccaatcaagtgtttattctg
gacagttggtggaaccctgctttggacacgggtcaggccgcagacagaattcaccggatt
ggacagcaccggcctatcagaattgtgaagttggtcatcgaagacagtatcgagtcgcgg
atcattgagctgcaacagaagaaggcagacatggtcaaggccacgttggaccaggaccag
aacgcggctagcaggctatcggctgctgacatgcagtttttgttcaataattga
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