KEGG   Ogataea parapolymorpha: HPODL_03996
Entry
HPODL_03996       CDS       T08137                                 
Name
(RefSeq) DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
opa  Ogataea parapolymorpha
Pathway
opa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HPODL_03996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_03996
Enzymes [BR:opa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HPODL_03996
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HPODL_03996
 Prokaryotic type
     HPODL_03996
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S
Other DBs
NCBI-GeneID: 25773427
NCBI-ProteinID: XP_013934251
UniProt: W1QEQ7
LinkDB
Position
V:394713..395864
AA seq 383 aa
MVLKKIKDELGPSLYFTERQTRRSRLTASPSKVSTIDETNDAKEIYEYESKELLSISPQS
NKHHDVMNSKRRRSQVKTESDSKDLIAAVKIKKQRVSRATSTETLPTQPPPHFWPMYNEI
KKMRSRIKAPVDEMGCANVATTVSGLSEGKVYRFQCLISLMLSSQTKDEVNFQVMKILQD
YFISKGYEHGLSLEAILDIDELVLDQLIYKVGFHRRKATYIKQTANILHEKYNGEIPRTI
EEITSFPGVGPKMGFLLLQIAWNINTGIGVDTHMQRMAKIFKWVPASKNMSPEYVRRCFE
SMLWDHKEEWSRINPILVGFGQVVCLPQRPRCDVCTLSRTGICPAVDKALLKKADMDKQN
GIKIDSKSRGDLSNLIKDIEDLR
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggtgttgaaaaagatcaaagacgagcttggtcccagcctgtactttaccgaaaggcaa
acaaggagatcaagactgactgctagtccatcaaaagtttcgactattgatgagactaat
gatgcgaaagaaatatatgaatatgagagcaaagaattgttaagcatttcaccacaatca
aacaagcatcacgatgtaatgaacagcaagcgtagaagaagtcaagtcaagacggagagc
gattcaaaggatttgatagcagcagttaaaattaaaaaacaacgcgtgtctcgagcgact
tccacagaaactctacctacgcagcctccaccacatttttggccgatgtacaacgaaatc
aagaagatgagaagcaggataaaagcacccgttgatgaaatgggctgtgcaaatgttgcg
actacagtctctggtctttccgaaggaaaagtgtacagattccagtgtcttatatcgttg
atgctctcttctcaaactaaagatgaggttaactttcaagtgatgaaaattttacaggat
tacttcatttccaaaggctatgaacatggtttgtcgttggaggccatactagacatcgac
gaactcgtcttggatcagctaatttataaggttggttttcatcgaagaaaagcgacatat
ataaaacaaacggctaacattcttcatgagaaatacaatggagagattccccgaacaatt
gaggaaatcacttcttttcctggtgtcggtccaaaaatgggattcttgttgttgcaaata
gcttggaatatcaacactggtattggagtggatacacacatgcaacgaatggcgaaaata
ttcaagtgggtacctgcaagcaagaatatgagtcccgaatatgtaaggcgatgttttgag
agtatgctttgggaccacaaagaggaatggtcaagaatcaatcccattctagttggtttc
ggtcaagttgtttgtctacctcagaggccacgatgtgatgtttgcactttgtcacggaca
ggtatctgccctgcagtcgacaaagctttgttgaaaaaggctgatatggacaagcaaaat
ggtatcaagattgattcaaaaagcagaggcgatctttccaatttgatcaaagacatagaa
gacttacgttaa

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