Ochotona princeps (American pika): 101516021
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Entry
101516021 CDS
T07609
Name
(RefSeq) nodal modulator 1
KO
K26500
BOS complex subunit NOMO
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101516021
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
101516021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOMO1-like_2nd
CarboxypepD_reg
NOMO1-like_1st
NOMO1-like_9th
NOMO_12th
NOMO_5th
SdrD_B
Ig_NOMO
SpaA
EMC7_beta-sandw
CarbopepD_reg_2
NOMO_3rd
NOMO_6th
fn3_3
DUF6795
NOMO_8th
DUF1416
Motif
Other DBs
NCBI-GeneID:
101516021
NCBI-ProteinID:
XP_004586848
LinkDB
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Position
6:complement(17213604..17253326)
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AA seq
1222 aa
AA seq
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MRAGRGAGSPGPMAVAAAVVLLLSGVGPARGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTSVELYVDGVSDICTKGG
DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRSTGTEAKIQSTVTQPGGKFAFFKVLPGD
YEILATHPTWALKEASTTVRVTNSNANAAGPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
LVTEEDVLGCNVSPVPGFQPPDESLVYLCYAVSKEDGSFSFYSLPSGDYTVVPFYRGERI
TFDVAPSRLDFTVEHDSLRIEPVFHVMGFSVTGRVLNGPEGEGVPEAVVTLNDQIKVKTK
ADGSFRLENITTGTYTIHAQKEHLYFDTVSIKIAPNTPQLADIIATGFSVCGQISILRFP
DTVKQMSKYKVVLSSQDKEKSVVTVETDAHGSFCFKAKPGNYKVQVLVPEAETRAGLTLK
PQLFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQALSRQGEKRSLQLSGKG
NSMTFTFDNVLPGKYKVSIVHEDWCWKNKSVEVEVLEEDVAAVEFRQTGYMLRCSLSHAI
TLEFYQDGNGPENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAQIETRRQE
REKNGKEEGGEGRTKPPAQEMVEELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
AVVSGESCPGKLIEIQGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
GPLHSDLEYTVSSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
VFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLRITITGYRTA
YSCYGTVSSLNGEPEQGVAMEAVGQKDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
EGNDHIERALPHHRVVEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
ENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYVLPQVSFAAVGYHKH
VTLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLHLTSRLQGVRALGQA
ASDNSGPEDAKRQAKKQKTRRT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgggccggggcgctgggtctccgggtcccatggcggtcgccgccgctgtggtg
ctgctgctgagcggcgtggggccggcgcgcggctccgaggacatcgtggtgggctgcggg
ggcttcgtcaagtcggacgtggagatcaactactcgctcatcgagataaagttgtacacc
aagcatgggactttgaaataccaaacagactgtgcccctaataatggttactttatgatc
cccttgtatgataagggagatttcattttgaagatcgaaccccccctcgggtggagtttt
gagccgacgagcgtggagctgtacgtggacggcgttagcgacatctgcaccaagggcggg
gacatcaactttgtgttcacgggcttctctgtgaacggaaaggtgctcagcaaaggccag
ccgctggggcccgcgggggttcaggtgtccctgagaagcaccggcacagaggcgaaaatc
cagtccacggtgacacagcccgggggaaagtttgcgttttttaaagttcttcctggagat
tatgaaatccttgcaacccatccaacctgggccctgaaagaggcaagcaccacagtgcgc
gtgaccaactccaatgccaatgcagcaggtcccctcatagtggctggttacaatgtgtct
ggctctgtccggagtgatggggagcccatgaaaggggtgaagtttctcctcttctcttct
ctagtgaccgaagaggatgtcctgggctgcaatgtctcgccggtgcccggcttccagcct
ccagatgagagcttggtgtatttgtgctatgcggtctccaaagaagatggctccttttcc
ttctattccttgcccagtggggactacaccgtggtcccattctacagaggggagaggatc
acctttgatgttgccccttccaggcttgattttacggtggaacacgacagcctgaggatc
gagcctgtgttccacgtcatggggttctccgtcactggcagagtcttgaacgggcccgaa
ggagaaggggttccggaggcagtggtcactctgaacgaccagatcaaagtcaaaaccaag
gctgatggctccttccgcctagagaacatcaccacggggacctacaccatccacgcacag
aaggagcacctctacttcgacacggtctccatcaagatcgcgcccaacaccccacagctg
gcggacatcatcgccacagggttcagtgtctgcggtcagatctccattctccgcttccct
gacactgtcaagcagatgagtaaatacaaagtcgtcctgtcctctcaagacaaggaaaag
tctgtggtcaccgtggagacagacgctcatgggtccttctgtttcaaagccaaaccgggc
aactacaaagtccaggtgctggtgcctgaggcagagaccagagcgggcctgactctgaaa
ccccagctgttccctctgaccgtgaccgacaggcccgtgatggatgtggccttcgtgcag
tttttggcctcggtttctgggaaggtctcctgcttggacacctgcggagacctgctggtg
accttgcaagccctgagccgccagggcgagaagaggagcctacagctctccggcaagggc
aactccatgactttcacctttgacaatgtcctcccggggaaatacaaagtgagcatcgtg
cacgaggactggtgctggaagaacaagagtgtggaggtggaggttctggaggaggacgtg
gcggctgtggagttcaggcagacgggctacatgctgcgctgctccctgtctcacgccatc
acactggaattctatcaggacgggaatggacccgagaacgtggggatttataacctctcc
aaaggagtcaaccgattctgcctgtccaagcctggtgtttacaaagtgacccctcgctcc
tgccaccggtttgagcaagccttctacacctatgacacgtcttcacccagtatcttgacg
ttgacagccattcgccaccacgtcctcgggaccatcaccacggacaagatgatggatgtc
actgtgaccatcaagtcttctatcgacagcgagccggccttggtcttaggccccctgaag
tctgtgcaggagctgcggcgggaacagcagctggcccagattgagacccgcaggcaggag
agggagaagaatgggaaggaggagggtggagaaggaaggaccaagccccccgcgcaggag
atggtggaggagttgcaaggtcccttctcctatgatttctcctactgggctcggtctgga
gagaagatcactgtcacgccgtcctctaaggagctgctcttttaccccccgtccatggag
gctgtggtcagtggagaaagctgccccgggaagctgatcgagatccagggcaaggcgggt
ttgttcttagaaggccagatccaccccgagttggaaggagtggagattgtcatcagcgag
aagggggcgagctcgcccctcatcacagtcttcactgacgacaaaggggcctacagcgtt
gggcccctgcacagtgacctggaatacaccgtgagctcccagaaggagggctacgtgctg
acagccgtggaagggaccataggcgacttcaaggcctacgccttggcaggcgtgagcttc
gagataaaagcagaagatgaccagcccctccctggggtcctcttatccctcagcggcggc
gtgttccgttccaacctcttgactcaagacaacggcatcctgaccttctcaaacctgagc
cctggccagtattacttcaagcccatgatgaaggagttccggtttgagccatcctcgcag
atgatcgaggtgcaagaagggcagaacctgaggatcaccatcactgggtaccgcacggcc
tacagttgctatggcaccgtgtcatctttgaatggagagccagagcagggggtcgccatg
gaagccgtgggacagaaggactgcagcatttacggagaagacacggtgactgatgaggag
ggcaagttcaggctccgtggcttgctgccggggtgcgtgtaccacgtccagctgaaggct
gaaggcaacgaccacatcgagcgggcgctgccccaccatcgggtggtcgaggttggcaat
aatgacatcgatgacgtgaacattatcgtcttccggcagattaatcagtttgatttgagt
gggaacgtgatcacttcctccgagtacctccccacgctatgggtcaagctgtacaaaagc
gagaacctggacaatcccatccagaccgtgtctctgggccagtccctcttcttccacttc
cccccgctgctgagagacggtgagaactacgtggtactgctggactccacgctccccaga
tcacagtacgactacgtcctgcctcaagtgtccttcgccgccgtgggctaccacaagcat
gtcaccctgatttttaaccccacgaggaagctccctgagcaagacatcgcccaaggatcg
tacatcgccctgccgctgacgctgctcgttctgctggccggttacaaccatgacaagctc
attcccttactgctgcatttgacaagtcggctgcagggagtacgtgccctcggccaggcg
gcctccgacaacagcggccctgaagacgcaaagagacaggccaagaaacagaagaccagg
cggacgtga
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