Ochotona princeps (American pika): 101516087
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Entry
101516087 CDS
T07609
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi05143
African trypanosomiasis
opi05145
Toxoplasmosis
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101516087 (LAMA4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101516087 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101516087 (LAMA4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101516087 (LAMA4)
09162 Cancer: specific types
05222 Small cell lung cancer
101516087 (LAMA4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101516087 (LAMA4)
09174 Infectious disease: parasitic
05146 Amoebiasis
101516087 (LAMA4)
05145 Toxoplasmosis
101516087 (LAMA4)
05143 African trypanosomiasis
101516087 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_LMN_ATRN
EGF_laminin
Laminin_G_3
BORCS6
Motif
Other DBs
NCBI-GeneID:
101516087
NCBI-ProteinID:
XP_004580368
LinkDB
All DBs
Position
12:complement(100048547..100201194)
Genome browser
AA seq
1822 aa
AA seq
DB search
MAWGSAWRSLLLPLWLIWGAGWSSAASGDDNTFPFDIEGSSAVGRQDPPETSEARVVPGR
LLPAAEKCDAGFFRAVSGECLPCDCNGNSDECSDGSGVCMHCLRNTTGEHCEKCLDGYIS
DSIRGPPRFCQPCPCPLPHLANFAESCYRKSGAVRCVCKENYAGPNCERCAPGYYGNPLL
VGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARRAKNCA
VCNCGGGPCDSVTGECLEEGFELPKGTDCPTISCDKCIWDLTDDLRLAAFSMEESKSGLL
SVSSGAAAHRHVNEMNSTIHLLKARLSERENQYVLRKIQINNAENTMRSLMSDLEELAGK
ESRASQKGQLVQKESMDTINHATQLVEQARNMRDKIQEINNKMLYYGEDQEFGPEEISEK
LVLAQNMLEEIRRRQPFFTQRELVDEEADEAHELLSQAENWQRLYNDTRSLFPVVLEQLD
DYDAKLSDLQESLDQALNHIRDAEDMNRATAARQRDHQKQHEKVREQMEVVNTSLNASVD
SLKTPRLSLLELDDIIKNASGIYAEIDGARNELQGKLSNLSNLSYDLVQEAIDHARNLQQ
EADELSRNLHSSDMNGLVQKALDASNVYENIANYISQANETAELALNITDRVYDAVSGID
TQIIYHKDESDNLLNQARELQAKADSSNQEAVADTSRRVGGALVRKSVLRNRLNDAIKQL
QATERGDTQKLLGQSRLIIAEANKTTLEVQQATVPMEANITNWKQNLQSFDSSVYNTAVD
SARDAVRNLTEVVPQLLDQLRTVEQKRPASNVSASIQRIRELIAQTRSVASKIQVSMMFD
GQSAVEVHPKTNIDDLKTFTSLSLYMKPPVKRPEEAGIADQFILYLGNKNAKKEYMGLAI
KNDNLVYVYNLGSKDVEIPLDSKPVSSWPAHFSIVKIERVGKHGKVFLTVPSLSSTAEEK
FIKKGAGDDSLLDLNPEDTVFYVGGVPSNFKLPASLNLPGFSGCLELATLNNDVISLYNF
KHIYNMDPAKSTPCARDKLAFTQSRAASYFFDGSSYAVVRDITRRGKFGQVTRFDIEVRT
PADNGLVLLMVNGSMFFSLEMRSGYLHVFYDFGFSNGPVHLEDTLKKALINDAKYHEISI
IYHNDKKMILVVDRRHVKSMDNEKMKIPFTDIYIGGAPPEVLQSRTLRTHLPLDINFRGC
MKGFQFQKKDFNLLEQKETLGVGYGCPEDSLISRRAYFNGQSFIASTQKISFFDGFEGGF
NFRTLQPNGLLFYYASGSDVFSVSLDNGTVVMDVKGTRVQSTDKQYNDGLSHFIVTSVSP
TRYELIIDKSRHRSMNSTNGKVEPMQTGEKKFYFGGSPISPQYANFTGCISNAYFTRLDR
DVEVEDFQRYSEKVHTSLYECPIEPSPLLLLHKKGKNSSKPKTNHNKKGEKSKDAPSWDP
AGLKFPEQSVPRDSHCHLSNSPRAIEHAYQYGGTANSRQEFEHLKGDFGEKSQFSIRLKT
RSSHGMIFYVSDQEENDFMTLFLAHGRLVFMFNVDHKKLKIRSQEKYNDGLWHDVIFIRE
KSSGRLIIDGLRVLEESLPPSGAAWKIKGPIYLGGVAPGRAVKNVQINSVYSFSGCLGNL
QLNGASITSASQTFSVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSS
SGTLVHGHSVNGEYLNVHMKNGQVIVKVNNGIRDFFTSVTPKQSLCDGRWHRITVIRDSN
VVQLDVDSEVNHVVGPLNPKPADHREPVFVGGVPESLLTPRLAPGKPFTGCIRHFVIDGR
PVSFSKAALVSGAVSINSCPVA
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggcttggggctcagcctggcgatcgctacttctgcctctgtggctcatttggggcgcc
ggctggtccagcgcggcgtcgggggacgacaacacgtttccttttgacattgaagggagc
tcagccgtgggcaggcaagaccctcccgagacaagcgaggcccgcgtggttccgggacgc
ctgctgcctgctgcagagaaatgtgatgctggattcttccgagctgtgtccggagaatgc
ttgccctgtgactgcaatggcaactctgatgaatgctcagatggctctggagtctgtatg
cactgcctgcgaaacacaacaggagaacattgtgaaaaatgtctggatggctatatcagc
gattccatcaggggcccacctcggttctgccagccatgcccctgtccccttcctcacttg
gccaattttgcagaatcctgctacaggaaaagtggagctgttcggtgtgtctgtaaagaa
aactatgctggacctaactgtgaaaggtgtgctcctggttactatggaaaccccttactc
gttggaagtacctgtaagaaatgtgactgcagtggaaattcagatcccaacctaatcttt
gaagactgtgatgaagtcactggccagtgtaggaattgcttgcgtaacacaacaggattc
aagtgtgaacgctgtgctcctggctactatggagatgcaaggagagccaagaactgtgca
gtgtgcaattgtgggggaggcccatgtgacagcgtaaccggagaatgcttggaagaaggt
tttgaactccctaaaggcacggactgcccaaccataagctgtgacaagtgcatctgggat
ctgacagatgacctgcggctggcagcattctccatggaggaaagcaaatcggggctactg
agcgtgtcttctggggctgcggctcataggcacgtgaatgaaatgaactccaccatccac
ctcctcaaagcaagattatcagagagagaaaaccagtatgtcctaagaaagatacaaatc
aacaatgctgagaacacaatgagaagtcttatgtctgacctagaggaattagctggaaag
gaaagtcgagcctcacagaaggggcaactggttcagaaggagagcatggatacaatcaac
catgcaactcagcttgtagagcaagcccgtaacatgagagacaaaatccaagaaatcaac
aacaagatgctttattatggagaggatcaggagtttggccctgaggagatctctgagaag
ctggtgttggcccagaatatgcttgaggagatcagacgtcggcagccattcttcacccaa
cgggagcttgtggatgaggaagcagacgaagcccacgaactgttgagccaggctgagaac
tggcagaggctgtacaatgacactcgctcgctgtttcctgtcgtcttggagcagctggat
gactacgatgcgaagctgtcagatctgcaggaatcactggaccaggccctgaaccacatc
agggatgctgaagacatgaacagggccacagcagccaggcagagggatcaccagaaacaa
catgagaaagtgagggaacaaatggaggtggtaaacacatctctgaatgcatctgtggac
tctctgaagacacctcgtctgagccttttggaacttgatgatataataaagaatgcatca
gggatttatgcagaaatagatggagccagaaatgaactgcaaggaaaactatccaaccta
agtaacctcagttatgacttagtacaagaagctattgaccatgcacgtaacctacaacaa
gaagctgatgagttgagcaggaatttacacagttctgatatgaatggattggtacagaag
gcactggatgcatcaaatgtctatgaaaatattgccaattacattagtcaagccaatgaa
acagcagaattagctttgaatatcactgaccgagtttatgatgctgtgagtggcattgat
actcaaataatttaccataaagatgaaagtgataaccttctcaatcaagccagagaactg
caagcaaaagcagattcaagcaatcaggaagcagtggctgacactagcagacgtgtgggt
ggagcccttgtgagaaaaagtgtcctcagaaacaggctaaatgatgccattaaacagcta
caagcaacagagagaggtgacacccagaagctcctgggtcagtccaggctgatcatcgct
gaagctaacaagaccacactggaggtccagcaggccactgtccccatggaggctaatata
accaactggaagcagaatctgcaaagcttcgactcttctgtttacaacactgcagtggac
tctgctagagatgcagtaaggaatctgacagaagttgtccctcagctcctggatcagctg
cggacggtagagcagaaacgacctgccagcaatgtttcagccagcattcagagaatccga
gagctcattgcacagaccagaagtgttgctagcaagatccaagtctccatgatgtttgat
ggtcagtcggcggttgaagtgcacccaaaaaccaatattgatgacctaaagaccttcacc
tccctcagcctatacatgaagccccctgtgaagcggccagaagaggctgggattgcagat
cagttcatcctgtatctcggaaacaaaaacgccaaaaaagaatatatgggtcttgcgatc
aaaaatgataacttggtgtatgtttacaatttgggaagtaaggatgtggagattccactt
gactccaagcccgtcagctcctggcctgctcacttcagcattgtcaagattgaaagggtt
ggaaaacatggtaaggtgtttttaacagtcccaagtctaagtagcacagcagaagagaaa
tttatcaaaaagggggcaggcgatgactccttgctggacctaaaccctgaggacactgtg
ttttatgttggtggggtgccttcgaacttcaagctacctgccagcttaaacttgcctggt
ttctcaggctgcctggaattggccactttgaataatgatgtgatcagcctgtacaacttt
aagcacatctataacatggatcctgccaaatcaacaccctgtgccagggataaactggcc
ttcactcagagccgtgctgccagttacttcttcgatggctctagttatgctgtggtgagg
gatatcacaaggagagggaaatttggtcaggtgactcgctttgacatagaagttcgaacc
ccagctgacaacggcctcgtgctcctgatggtcaatggaagcatgtttttcagcttagaa
atgcgcagtggttacctacatgtgttctatgacttcggatttagtaatggccctgtgcat
ctcgaagacacgctaaagaaagctctaattaatgatgcaaagtaccatgagatctcaatt
atttaccataatgataagaaaatgatcttggtggttgacagacggcatgtcaagagcatg
gataatgaaaagatgaaaataccttttacagatatatacattggaggagcacccccagag
gtattgcaatccaggaccctaagaacacatcttcctctagatatcaacttcagaggatgt
atgaaagggttccaattccaaaagaaagacttcaacttattggagcagaaagaaaccctg
ggagtcggttatggatgcccagaggactctcttatatctcgcagagcttatttcaatggg
cagagtttcattgcttcaactcagaaaatatctttcttcgatggctttgaaggaggcttt
aatttccgtacattacagccaaatggactgctattctactatgcatcagggtcagatgtg
ttttccgtttcactggataatggcacagtcgtaatggacgtgaagggcaccagggttcag
tcaacagataagcaatacaacgatgggctgtcccatttcatcgtcacctctgtgtcaccc
acaagatatgaactgatcatagataaaagcagacataggagtatgaattctaccaatggg
aaagtggaacctatgcaaacaggtgaaaagaagttttacttcggtggatctccaatcagt
ccccagtatgcaaatttcaccggctgtataagtaatgcctactttaccaggctagacagg
gatgtggaagtggaagatttccagcggtactctgaaaaggttcacacttctctttacgaa
tgtcccattgaaccctcaccattgcttctcctgcacaaaaaaggaaaaaattcctcgaag
cctaaaacaaatcacaacaaaaagggagagaaaagtaaagacgcaccttcctgggatcct
gctggcctgaaattcccagagcagagcgttccaagagactctcactgccacctctccaac
agccccagagcgatagagcacgcctatcaatatggggggactgccaacagccgccaagag
tttgaacatttaaaaggagattttggtgaaaaatctcagttttccattcgtctgaaaact
cgttcctcccatgggatgattttctacgtttcggatcaagaagagaatgacttcatgact
ctatttttagcacacggccgcttggttttcatgtttaatgttgatcacaagaaactgaag
attagaagccaggagaagtacaatgatggattgtggcatgatgttatatttattcgggaa
aagagcagtggccggctgatcattgatggtcttcgagtcctggaagaaagtcttcctcct
agtggggctgcctggaaaatcaagggccctatttatttgggaggtgtggcccctggaagg
gctgtgaagaatgtccagattaattcagtctacagcttcagtggctgtcttggcaatctc
cagctcaatggggcctccatcacctctgcttcccagacatttagtgtgaccccttgtttt
gaaggtccaatggaaacaggaacttacttttcaacagaaggaggatacgtggtgctagat
gaatctttcaatattggactgaagtttgaaatagcatttgaagtccgacccagaagcagt
tctggaacccttgtccatggccacagtgtcaatggggagtacctaaatgttcacatgaaa
aatggacaggtcatagtgaaagtcaacaatggtatcagggactttttcacctcggtgacg
cccaagcagagtctctgtgacggcagatggcacagaattacagttattagagattcaaat
gtggttcagttggacgtggactctgaagtgaaccatgtggttggacccctgaatccaaag
cctgctgatcacagggagcctgtgtttgttggaggtgttccagagtctctgttgacgcca
cgcttggcacctggcaaacctttcacaggctgcatccgccactttgtgattgacgggcgc
ccagtgagtttcagcaaggcagccttggtcagcggcgctgtgagcatcaactcctgtcca
gtagcctga
DBGET
integrated database retrieval system
