Ochotona princeps (American pika): 101516108
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Entry
101516108 CDS
T07609
Symbol
RALGAPA1
Name
(RefSeq) ral GTPase-activating protein subunit alpha-1 isoform X5
KO
K25768
Ral GTPase-activating protein subunit alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101516108 (RALGAPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101516108 (RALGAPA1)
Membrane trafficking [BR:
opi04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
101516108 (RALGAPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
RALGAPB_N
RCDG1
Motif
Other DBs
NCBI-GeneID:
101516108
NCBI-ProteinID:
XP_004584820
LinkDB
All DBs
Position
17:33405750..33628071
Genome browser
AA seq
2083 aa
AA seq
DB search
MFSKKPHGDVKKSTQKVLDTKKDALTRLKHLRIVIENAESIDLKQFFDQHFSHIYYVFFE
NFVTIEASLKQKGHKSQREELDAILFIFEKILQLLPERIHQRWQFHSIGLILKKLLHTGN
SLKIRREGVRLFLLWLQALQNNCSKEQLWMFSCLIPGFLAPQSEHGPRTLDNLINPPLNL
QETQVTIEEITPLVPPQSGDKGQEDLTSYFLEALLKYIVIQVKSLEWKNKENQERGFSFL
FSHFKKYYLPYIFPNICKENSLYHPVLDIPQMRPKPHYVMIKKDAETNEAIYCTKEPFIK
ARVIVIRWLVSFWLEPKPHSGPHIPGMEGEVLPKNIQRAAASLVSREENKNDNADRADRS
AEPEQSHSNTSTLTEREPSSSSLCSIDEEHLTDIEIVRRVFSSKRSNVNFVTEIFRQAFL
LPICEAAAMRKVVKVYQEWIQQEEKPLFMQEPEEIVMTSSDLPCINSVTDHEIPVEGEKR
EEENGTSIADHVRNSNWANNGSYPDALPNAPEEATEENIRAGTQAVLQVFIINSSNIFLL
EPANDIKNLLDEHTDMCKRILNIYRHMVVQVSMDKKTWEQMLLVLLRVTESVLKMPSQAF
LQFQGKKNMNLAGRLAGPLFQTLIVAWIKANLNVYISRELWDDLLSVLSSLTYWEELATE
WSLTMETLTKVLARNLYSLDLSDLPLDKLSEQKQKKHKGKGVGHEFQKVSVDKSFSRGWS
RDQPGQAPMRQRSATTTGSPGTEKARSIVRQKTVDIDDAQILPRSTRVRHFSQSEETGSE
VFGALSEEPPLPRSSSTSDILEPFTVERAKVNKEDVSPKLPPLNSDIGSSSANVPDLMDE
FIAERLRSGNASIMTRRGSSPGSLEIPKDLPDILNKQNQPRPVDDPGVPSEWTSPASAGS
SDLISSDSHSDSFSAFQYDGRKFDNFGFGADAGIASSTDVDSGSGHPQSAEEQEVASLTT
LHIDSETSSLNQQAFSAEVATVTGSESASPVPSALGSRSQTPSPSALHVDPLEQKDLQLD
EKLHHSVLQTPDDLEISEFPSECCSVMAGGTLTGWHADVATVMWRRMLGILGDVNSIMDP
EIHAQVFDYLCELWQNLAKIRDNLGISTDNLTSPSPPVLIPPLRILTPWLFKATMLTDKY
KQGKLHAYKLICNTMKRRQDVSPNRDFLTHFYNIMHCGLLHIDQDIVNTIIKHCSPQFFS
LGLPGATMLIMDFIVAAGRVASSAFLNAPRVEAQVLLGSLVCFPNLYCELPALHPNIPDI
AVSQFTDVKELTVKTVLSSARDEPSGPARCVALCSLGIWICEELVHESHHPQIKEALNVI
CVSLKFTNKTVAHVACNMLHMLVHYVPRLQIYQPDSPLKIIQILIATITHLLPSTEASSY
EMDKRLVVSLLLCLLDWIMALPLKALLQPVHVAGTENDKTEKSVLNCIYKVLHGCVYGAQ
CFSNPRYFPISLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQQGL
ISIAARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPELFESPNIQFFV
LNNTTLVSCIQIRSEESMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSAILYGPPPVSG
FSEPVSFILSLSHQEKHEEPAATNECLEDTAVKDDLSLQYKRLRETVPTWDTIRDEEDVL
DELLQYLGVTSPECLQRTGISLNIPAPQPVCISEKQENDVINAILKQYTEEKEFVEKHFN
DLNMKAVEQDEPTPQKPQSAFYYCRLLLSILGMNSWDKRRSFHLLKKNEKLLRELRNLDS
RQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYEDFVAGLGWEVNLTNHCGFMGGLQKN
KSTGLTTPYFATSTVEVIFHVSTRMPSDSDDSLTKKLRHLGNDEVHIVWSEHTRDYRRGI
IPTEFGDVLIVIYPMKNHMFSIQIMKKPEVPFFGPLFDGAIVNGKVLPIMVRATAINASR
ALKSLIPLYQNFYEERARYLQTIVQHHVEPTTFEDFAAQVFSPAPYHHLPSDAVGSYSEI
LPSEAATATQVDGADLASPMSPRTSKSRMSMKLRRSSGSANKS
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaagaagccgcacggggacgtgaagaagtccacccagaaggtgctggacacc
aagaaggacgcgctgacccgcctcaagcacctgcgcatcgtcatcgagaatgcagaatct
attgatcttaagcagttttttgaccaacatttttcacatatatactatgtgttctttgaa
aattttgtgaccattgaagctagtcttaaacagaaaggtcacaagtctcaaagggaagaa
ttggatgctatacttttcatttttgagaaaatattacaacttcttccagaaagaattcat
caacgatggcagtttcatagtattggactgatcttgaagaaacttcttcacacaggaaac
tccttaaagattaggcgggaaggtgttcgtctgttcttgttatggttgcaagctcttcag
aataactgcagcaaggaacagctctggatgttctcgtgcttaattcccgggtttttagca
ccacagtctgaacacggacctcgaactttagataatctcattaatcctccactcaatctt
caagaaacccaagtcacaatagaggaaatcactcctcttgtcccaccacagtctggggat
aaaggacaagaagatctcactagctattttcttgaagcacttttaaagtatatagtaatt
caggtgaaaagtttagaatggaagaacaaagaaaaccaagaaagaggattttcgtttttg
ttttcacattttaaaaaatattacttaccttatattttcccaaacatctgtaaggaaaac
agtttatatcatcctgtacttgatatcccacaaatgagaccaaagccacattatgtcatg
ataaagaaggatgctgaaaccaatgaagccatctattgtacaaaggaaccttttatcaag
gctcgtgttattgtcattcgttggctggtttctttctggctagagccaaagccacattca
ggacctcatattcctgggatggaaggtgaagtcttgccaaagaatattcagagagcagct
gctagtttggtatccagagaagaaaataaaaatgataatgctgacagagcagacagaagc
gcggaaccagagcagtctcactccaataccagcacactcaccgagcgggagccgagctca
tccagcctgtgtagcatcgatgaagagcatctcacggatattgaaatcgttcgcagagtt
ttttcttctaaaagaagtaatgtgaactttgtcacagagatatttcgtcaggcattttta
ttacccatctgtgaagcagctgcaatgaggaaggtggttaaggtatatcaagaatggatt
cagcaggaggaaaagcctttgttcatgcaggagcctgaagaaattgtaatgacttcttca
gatttaccttgtattaacagtgttactgaccatgagattccagtggaaggagaaaaacga
gaagaggaaaatgggaccagtattgctgatcatgttcgaaattccaactgggcaaacaat
ggctcctacccggatgcccttcctaatgccccggaggaagccacggaagaaaacatacga
gctggtacccaggcagttttgcaggttttcattataaattcatcaaacatatttctcctt
gaacctgcaaatgatataaaaaatcttttggatgaacacacagatatgtgtaaacgtatt
cttaacatttaccggcacatggttgtacaggtgtcaatggacaaaaaaacctgggaacag
atgctgcttgtattgctcagagtcacggagtctgtactgaagatgccatcacaagctttt
ctgcagttccaggggaaaaaaaatatgaacttggcaggtcgacttgcaggaccacttttc
cagactctcatagttgcctggatcaaagccaatctaaatgtgtatatctccagagagctt
tgggatgacttactgtcggttctgtcatcgttgacctactgggaagagctggccaccgag
tggtcactgactatggagacattaaccaaagttttagctaggaatttatatagtttggat
ctcagtgatttaccattggataaactcagtgaacaaaaacaaaaaaagcacaaagggaaa
ggagttggacatgaatttcagaaagtttccgttgacaagtcattttctagaggatggagt
cgtgatcagcccggccaagccccgatgagacagaggagtgcgaccaccactggctcccca
ggaaccgagaaggcgagaagtatagtgcggcagaagaccgtagacatcgatgatgctcag
atacttccccgctccaccagagtcaggcatttttcacaaagcgaagaaactggcagtgaa
gtttttggggccttgagtgaggagccgccattgcctcgaagcagcagcacttccgacatc
ttggaaccattcactgttgagcgagccaaagtcaataaagaggacgtgagccccaaactg
cctcctcttaatagtgatattggcagcagcagtgctaatgttcctgatctgatggatgag
tttatagcagaacgactccgaagtggtaatgcctcgatcatgacgagaagaggaagtagt
cctggtagccttgaaattcccaaagacctcccggatattctcaacaagcagaaccagccg
cgcccggtggacgaccccggcgtgccctccgagtggacctcgcccgccagcgcagggagc
agcgacctgatcagctccgacagtcactcggattccttcagcgccttccagtatgatggc
cggaagtttgacaattttggcttcggagccgacgctgggattgcatcctccactgatgtg
gattcaggttctggccatcctcagagtgctgaggagcaggaagtggccagtctaaccacg
cttcacatagattctgaaacaagcagccttaaccagcaagcgttctcagctgaagtggca
actgttactggttcagagagtgcctcgccagtgccctcggccctggggtcccggtcgcag
acgccttctccctcggccctgcacgtggatcccctggagcagaaggacttgcagcttgac
gagaagctccaccactcggtcctgcagacgccggatgacctagaaatcagtgaatttcca
tctgaatgttgcagtgtgatggctggggggacactcaccggatggcatgctgacgttgct
actgtaatgtggagaagaatgctaggcattttgggcgatgtcaattctatcatggatcct
gaaatacacgctcaagtgtttgattacctctgtgaactgtggcaaaatctggccaagatc
agagataacctcggcatctccacggataacctcacctccccttctccgcccgttctgatt
cctccactgaggattcttacaccttggctcttcaaggcaaccatgttgactgataaatac
aagcaaggtaagctacatgcttacaaacttatttgtaatacaatgaaaagaagacaagat
gtgtctccaaatagagattttctaacacatttctacaatataatgcactgtgggttactt
catattgatcaggatattgtcaatacaatcatcaagcattgctcacctcagtttttttca
cttggcttgcctggtgccacaatgcttattatggattttattgtagcggctggtagagtg
gcttcgtcagctttcctcaatgcaccaagagtggaagcacaagttcttctgggatctttg
gtttgctttcccaacttatattgtgaactgcctgccctgcatcccaacattcctgatatt
gctgtgtctcagttcacagatgttaaggaacttacagtcaaaactgtattaagctcagca
agagatgagccatctggtcctgcacgatgtgtagccctttgcagtttaggtatttggatt
tgtgaagaactagtccatgagtctcatcatcctcaaattaaggaagctctgaatgtaatt
tgtgtttccctaaagtttactaataaaacagtagcccatgttgcttgtaatatgcttcat
atgctggttcactatgtacctagacttcagatttaccagcctgattctcccttgaagatt
attcaaatcctaatagccaccatcacccatctattgccaagtactgaagcctcatcttat
gaaatggacaagaggttggtggtgtccttacttctgtgccttctggactggatcatggcc
ttacccctaaaggcgctgctccagccagtccatgtagcaggaacagaaaatgacaaaacg
gagaaatcggtcctcaactgcatttataaggtcttacatgggtgtgtctatggagctcag
tgtttcagcaatcccaggtattttcccataagcctgtctgacttggcctctgtggactat
gatcctttcatgcatttggagagtctgaaagagcctgaaccgctacactctcctgactca
gagcggtcttctaaactccagccagtcacagaagtgaaaacccagatgcagcaagggtta
atctccatagctgcccgcactgttattacgcatcttgtgaatcacttgggccattatcca
atgagtggtggtcctgctatgttaacaagtcaggtgtgtgaaaatcatgacaatcattac
agtgaaagtactgaactttccccggaactttttgaaagtccaaatatccaattctttgtg
ttaaacaatacaactttggtgtcctgtatccaaatcagatcggaggagagtatgcctgga
gggggtttgtctgctggccttgcatcagccaactctaatgtcagaatcatagtacgtgat
ctctctggaaagtattcatgggattctgccatactgtatggtccccctcctgtgagtggc
ttctcagaaccggtctcttttatactatcattgtctcaccaagagaagcatgaagagcct
gctgcaaccaacgaatgcttggaagatacagcagtaaaagatgacctgtccctccagtat
aaacggcttagagagactgtcccaacctgggacaccatcagagatgaagaagacgttctg
gatgagctgctgcagtatttgggtgttaccagtcctgaatgcttacagagaactggaatc
tcacttaatatccctgctccacaacccgtgtgcatttctgaaaaacaggaaaatgatgta
attaatgctattcttaagcaatatacagaggaaaaagaatttgttgagaagcacttcaat
gacttaaacatgaaagctgttgaacaagatgaaccaacacctcagaaacctcagtcagcg
ttttattactgccgattgcttcttagtatattgggcatgaattcctgggacaaacggagg
agctttcatctcctgaagaaaaatgaaaaactgcttagagaacttaggaacttggattca
aggcagtgcagagagacacacaagattgcagtattttatgttgctgaaggacaggaagac
aaacactccatcctcaccaacacaggaggaagtcaagcatatgaagattttgtagctggt
cttggttgggaggtaaatcttacaaaccattgtggctttatgggaggactgcagaaaaac
aaaagcactgggttgaccaccccctactttgctacctctacagtagaagtcatatttcat
gtgtcaacaagaatgccctctgattctgatgactctctgaccaaaaaattgagacattta
ggaaatgacgaagtacacattgtttggtcagagcatactagagactacagacgaggaatc
attcctacagagtttggtgatgtccttattgtaatatatccaatgaaaaatcacatgttc
agtatccagatcatgaaaaaaccagaggttcccttctttggtccactttttgatggtgct
attgtgaatggaaaggttctacccattatggttcgagcaacagccataaatgcaagccga
gctctgaagtcactgatcccgttgtatcagaacttctatgaggagagagcccggtacctg
caaacaattgttcagcaccatgtagagccaacgacgtttgaggatttcgcagcgcaggtt
ttttctccagctccctaccaccatttgccatccgatgctgttggctcctactcagagatt
ctacccagtgaagctgccacagccacgcaggtagatggggctgacctggcctcgccaatg
tctcctcgaactagcaagagccgcatgtccatgaagctgcgtcgttcctctggctcagcc
aataaatcctaa
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integrated database retrieval system
