Ochotona princeps (American pika): 101516125
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Entry
101516125 CDS
T07609
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi01521
EGFR tyrosine kinase inhibitor resistance
opi04010
MAPK signaling pathway
opi04014
Ras signaling pathway
opi04015
Rap1 signaling pathway
opi04020
Calcium signaling pathway
opi04072
Phospholipase D signaling pathway
opi04144
Endocytosis
opi04151
PI3K-Akt signaling pathway
opi04510
Focal adhesion
opi04540
Gap junction
opi04630
JAK-STAT signaling pathway
opi04810
Regulation of actin cytoskeleton
opi05163
Human cytomegalovirus infection
opi05200
Pathways in cancer
opi05206
MicroRNAs in cancer
opi05214
Glioma
opi05215
Prostate cancer
opi05218
Melanoma
opi05230
Central carbon metabolism in cancer
opi05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101516125 (PDGFRA)
04014 Ras signaling pathway
101516125 (PDGFRA)
04015 Rap1 signaling pathway
101516125 (PDGFRA)
04630 JAK-STAT signaling pathway
101516125 (PDGFRA)
04020 Calcium signaling pathway
101516125 (PDGFRA)
04072 Phospholipase D signaling pathway
101516125 (PDGFRA)
04151 PI3K-Akt signaling pathway
101516125 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101516125 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
101516125 (PDGFRA)
04540 Gap junction
101516125 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101516125 (PDGFRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101516125 (PDGFRA)
05206 MicroRNAs in cancer
101516125 (PDGFRA)
05230 Central carbon metabolism in cancer
101516125 (PDGFRA)
05231 Choline metabolism in cancer
101516125 (PDGFRA)
09162 Cancer: specific types
05214 Glioma
101516125 (PDGFRA)
05218 Melanoma
101516125 (PDGFRA)
05215 Prostate cancer
101516125 (PDGFRA)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101516125 (PDGFRA)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
101516125 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
opi01001
]
101516125 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
opi04090
]
101516125 (PDGFRA)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101516125 (PDGFRA)
Protein kinases [BR:
opi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
101516125 (PDGFRA)
CD molecules [BR:
opi04090
]
Proteins
101516125 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
DUF3475
Herpes_gE
Kinase-like
Motif
Other DBs
NCBI-GeneID:
101516125
NCBI-ProteinID:
XP_004590971
LinkDB
All DBs
Position
15:complement(84734424..84763233)
Genome browser
AA seq
1171 aa
AA seq
DB search
MLRWALCGPWRSPEDEWTQLEPGVEEGAALPSRLGVPLREAWLPLLASRAESEGEARAMQ
WGAPLTPGAHSPLVLARQLPGAMVLSCQAFLVLSWLLAGSGLTRCELPLPSISPGDSERV
VPLNASFSLRCSGESELNWQYPTSEDESPRVRVRSEENNSGLFVAVLEVASATAAHTGWY
TCYYNHTQTEDGDVEGSHVYIYVPDPDVAFVPLGMTDYLVIVEDDDSAIIPCRTTDPETH
VTLRNSHGVVSASYDNKHGFNGTFTMGPYVCEATVHGRTFQTIPFNIYALKATSELDLEM
EALQTVYKAGETIVVTCAVFNNEVVDLQWAYPGEVRGKGVTALEEIKVPTLKLVYTLTVP
GATVKDSGDYECAARQATREVKEMKKVTISVHEKGFVEIQPAFSQSEAIGLHEVRHFVVD
VRAYPPPHISWLKDSLTLIENLTEITTDVEKVQEIRYRCKLKLIRAKEEDSGHYTIVVQN
EDAVQSYTFELLTQVPASILDLVDDQHGSTGGQTVTCTASGMPPPEIEWLICKDIKKCNN
DTSWTILASNISNIITETHPRGRSVVEGRLTFSKVEETLAVRCLARNPLGTENRELKLVA
PSLRSELTVAAAVLVLLVIVIVSLIILVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPM
QLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEK
QALMSELKIMTHLGPHLNIVNLLGACTKAGPIYIITEYCFYGDLVNYLHKNRDSFLSRHP
EKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQAESTQYVPMLERKEVSKYADIQ
RSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRD
LAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV
WSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPE
KRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNAYVGVTYKNEED
KLKDWEGGLGEQRLSADSGYIIPLPDIDPMPEEEDGGKRNRHSSQTSEESAIETGSSSST
FLKREDETIEDMDLLDDVGVDPSDLVEDSFL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctgggcgctgtgtggcccctggaggagcccggaggatgagtggactcagctg
gagccgggggtggaggagggggcggccttgccgtccagactaggagtccccctgcgcgag
gcctggctgccgttgctggccagccgggcggagtccgagggggaggcccgggccatgcag
tggggggcccctctgacgcctggggcccacagccccttagtgctcgcgcgccagctacct
ggcgccatggtgctctcctgtcaagccttcctggtccttagctggctgttggcagggtca
ggcctcacgcgctgcgaactgcctctgccgtccatctctccgggcgatagcgagcgcgtg
gtgccgctgaatgcctcgttctctctgcgatgctccggggagagtgagctgaactggcag
taccccacatccgaggacgagagccccagggtgcgtgtgcgcagcgaggagaacaacagt
ggcctctttgtggccgtgctggaggtggccagtgccacggcggcccacactggctggtac
acctgctactacaaccacacgcagacggaggatggcgacgtggagggcagccacgtgtat
atctatgtgccggacccggatgtcgcctttgtgcccctggggatgactgactacttggtg
attgtggaagacgacgactcagccatcatcccatgtcgcaccacggaccccgagacccat
gtcaccctgcgcaacagccatggggtggtgtctgcctcctacgataacaagcatggcttc
aatggcaccttcaccatggggccgtacgtgtgcgaggccaccgtccatgggaggaccttc
cagaccatccccttcaacatctatgccttgaaagccacctcagaattggatctcgaaatg
gaagccctgcagacagtgtataaggctggggagacgatcgtggtcacctgtgctgtcttc
aacaatgaagtggtggacctgcagtgggcctaccctggcgaggtgaggggaaaaggtgtg
acggcgctggaagagatcaaagtcccgaccctcaagctggtgtacactctgaccgtgcct
ggggccacggtgaaggacagcggagactacgagtgtgccgcccgccaggccaccagggag
gtcaaggagatgaagaaggtcaccatttctgtgcatgagaagggcttcgtggagatccag
cccgccttcagccagtccgaggccatcggcctgcacgaggtccggcatttcgtggtggat
gtgcgggcctacccgccgccgcacatctcctggctcaaggacagcctgacactcatcgag
aatctcaccgagatcaccactgacgtggagaaggtccaggagatcagatatcgatgcaag
ctgaagctcattcgtgccaaggaggaagacagtggccactacaccatcgtggttcagaac
gaagatgccgtgcagagctacacattcgaactcttgactcaagttcccgcgtccatcctg
gacctggtggacgatcagcacggctccaccggcgggcagacagtgacgtgcacggccagc
ggcatgccccctcccgagatcgagtggctcatctgcaaggatatcaagaagtgtaacaat
gacacgtcgtggacgatcctggccagcaacatctccaacatcatcacggagacccacccc
cgaggcaggagtgtggtggagggtcggctcaccttctccaaggtggaggagaccctggcg
gttcgctgcctggccaggaatcccttggggactgagaaccgagagctgaagctggtggct
cccagcctgcgctctgagctcaccgtggcagccgcagtcctggtgctcctggtgattgtg
atagtctcactgatcatcctggttgtcatttggaaacagaaacccaggtacgagatccgc
tggagggtgattgagtccatcagccccgatggacacgagtacatttacgtcgaccccatg
cagctgccttacgactcgcgatgggagtttcccagagatggactcgtgctgggtcggatc
ctgggctccggagcttttgggaaggtggtggaaggcacagcctatggactgagccggtcc
cagcctgtgatgaaagtggctgtgaagatgttgaaacccacggcccgatccagtgagaag
caggccctcatgtcagaactgaagatcatgactcacctggggccacacctgaacatcgtc
aacctgctgggcgcctgcaccaaggcgggccccatttacatcatcaccgagtactgcttc
tacggtgacttggtgaactatttgcataagaacagggacagctttctgagccgccacccg
gagaagcccaagaaagagttggacatctttggtctgaacccagcagacgagagcacgcgc
agctacgtgattttatctttcgagaacaatggtgactacatggacatgaagcaagccgag
agcacgcagtacgtgcccatgctggagaggaaagaggtctctaagtacgcggacatccag
cggtcactctacgaccgtccggcttcctacaagaagaaatccatgctagattcggaagtc
aagaaccttctttcggatgacaactccgaaggcctcaccttgttggatttgttgagtttc
acctaccaagttgctcgtggcatggaatttttggcttccaaaaattgtgtccaccgggac
ctggctgcacgcaacgtccttctggcacaagggaagattgtcaagatctgtgactttggt
ctagccagggatatcatgcatgattccaactacgtctccaaaggcagcaccttcctgcct
gtgaagtggatggcccctgagagcatcttcgacaacctctacaccacgctgagcgatgtc
tggtcctacggcattctgctctgggagatcttctctctggggggcactccctatcctggc
atgatggtggattccacattctacaacaagatcaagagcgggtaccggatggccaagccc
gaccatgccaccagtgaagtttacgagatcatggtcaaatgctggaacagtgagccggag
aaacgaccctcgttttaccacctgagcgagattgtggagaatttgctgcctggacagtat
aagaagagctatgagaaaattcacctggacttcctgaagagtgaccacccagccgtggct
cgcatgcgcgtggactcggacaacgcgtacgtcggcgtcacctacaagaatgaagaagac
aagctcaaggactgggagggtggcctgggcgagcagaggctgagcgccgacagcggctac
atcatcccgctgcctgacatcgaccccatgcccgaggaggaggatgggggcaaacgcaat
cgtcacagctcgcagacctccgaggagagcgccattgagacaggctccagcagctccacc
ttcctgaagagagaggacgagaccatcgaagacatggacctgctggacgacgttggcgtg
gacccctcggacctggtggaggacagcttcctgtga
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integrated database retrieval system
