Ochotona princeps (American pika): 101516138 Help Entry 101516138         CDS       T07609                                  Symbol SMARCA4 Name (RefSeq) transcription activator BRG1   KO K11647   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] Organism opi  Ochotona princeps (American pika) Pathway opi03082   ATP-dependent chromatin remodeling opi04714   Thermogenesis opi05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:opi00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     101516138 (SMARCA4)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     101516138 (SMARCA4)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     101516138 (SMARCA4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:opi03021]     101516138 (SMARCA4)    03036 Chromosome and associated proteins [BR:opi03036]     101516138 (SMARCA4) Transcription machinery [BR:opi03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      101516138 (SMARCA4) Chromosome and associated proteins [BR:opi03036]  Eukaryotic type   Histone modification proteins    HDAC complexes     REST complex      101516138 (SMARCA4)   Chromatin remodeling factors    BAF complex     101516138 (SMARCA4)    PBAF complex     101516138 (SMARCA4)    GBAF(ncBAF) complex     101516138 (SMARCA4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C Bromodomain HSA ResIII BRK DEAD HDA2-3 DUF2009 Motif Other DBs NCBI-GeneID:  101516138 NCBI-ProteinID:  XP_012785360 LinkDB All DBs Position Unknown AA seq 1175 aa AA seqDB search MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPMPTQG PGGYPQDSVHQMHKPMEAMHEKGVSDDPRYNQMKAVGMRSGGHAGMGPPPSPMDQHSQVS VAPVCVLLKPQPALLALQPGRGHTRAASRGPGERESAPLALQTARLQARIAHRIQELENL PGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLR EARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKVQKLTKAVATYH ANTEREQKKENERIEKERMRRLMGCPEAGPPRRRGQGLAGDAPRVSRVPKAGQLEAWLET HPGYEVAPRSDSEESSEEEEEEEEEEEQPQPAQPPTLPVEDKKKIPDPDSDDVSEVDARH IIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWL VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKW APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR MKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQR VLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGF TGGIVQGLDLYRASGKFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLR LDGTTKAEDRGTLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQAPG WSVLPGAGWSVFPLLTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSEAGSSTPTTGTRSRD KDEESKRQKKRGRPPAEKLSPNPPSLTKKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRK ELPEYYELIRKPVDFKKIKERIRSHKYRSLGDLEKDVLLLCQNAQTFNLEGSLIYEDSIV LQSVFTSVRQKVEKEEESEGEESEEEEEAEEEGSDSTSRSVKVKIKLGRKEKAQERLKGA RRRPGRGSRAKPVVSEEDSDEEQDEDRSGSGSEED NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgtctacaccagacccgcctctgggcgggactcctcggccgggcccttccccgggccct gggccctcgccaggagccatgctgggccctagcccaggcccttcgccgggctctgcccac agcatgatggggcccagcccggggccgccgtcagcaggacaccccatgccaactcagggg cccggcggctaccctcaggacagcgtgcaccagatgcacaagcccatggaggccatgcat gagaagggcgtgtcggacgacccacgctacaaccagatgaaagcagtgggcatgcgctct ggcggccacgcgggcatggggcccccacccagccccatggaccagcattcccaagtgtct gtagcacctgtgtgcgtcctgctgaagccacagccggccctgctggccctgcagccaggc cgaggccacaccagggctgcctcccgggggccgggtgagagggagtctgccccgctggcc ctgcagacagccaggctgcaggcccgcatcgcgcaccgaattcaggaacttgaaaacctt cccgggtcgctggccggggatctgcgaaccaaagcgaccattgagctcaaggccctccgg ctgctgaacttccagagacagctgcgccaggaggtggtggtgtgcatgcggagggacacg gcgctggagacggcgctcaatgccaaggcctacaagcgcagcaagcgccagtccctgcga gaggcccgcatcacggagaagctggagaaacagcagaagatcgagcaggagcgcaaacgg cgccagaagcaccaggaatacctcaacagcatcctgcagcacgccaaggacttcaaggag taccaccggtccgtgacaggcaaggtgcagaagctcaccaaggccgtggccacgtaccac gccaacacggagcgcgagcagaagaaggagaacgagcggatcgagaaggagcggatgcgc aggctcatgggctgccccgaggccgggcccccgaggcgcaggggacagggcctggctgga gatgcaccccgggtgagcagggtccccaaggccgggcagctggaggcctggctggagacg caccccgggtatgaagtcgctcccagatccgacagtgaggagagctcggaggaagaggag gaggaggaggaagaggaggagcagccgcagccggcgcagcctcccaccctgcccgtggag gacaagaagaagattccagacccagacagtgatgacgtctcggaggtggacgcccggcac atcattgagaacgccaagcaggatgtggatgacgagtacggcgtgtcacaggccctggcc cgtggcctgcagtcctactacgccgtggcccacgccgtcaccgagagggtggacaagcag tcggcactcatggtcaacggcgtcctgaagcagtaccagatcaagggcctggagtggctg gtgtcactttacaacaacaacctgaacggcatcctggcggacgagatgggcctgggcaag accatccagaccattgccctcatcacgtacctcatggagcacaaacgtatcaacgggccc ttcctcatcatcgtgcccctctcgaccctgtccaactgggcatatgaattcgacaagtgg gccccatctgtggtgaaggtgtcctacaagggatctccggctgcaagacgggcttttgtc ccccagctccggagtggcaagttcaatgtcctgctgaccacctatgagtacatcatcaaa gacaaacacatcctcgccaagatccgttggaagtacatgatcgtggatgagggccaccgc atgaagaaccaccactgcaagctgacgcaggtgctgaacacacactacgtggccccacgg cggctgctgctcacgggcacgccgctgcagaacaagctgcccgagctctgggcgctgctc aacttcctgctgcctaccatcttcaagagctgcagcaccttcgagcagtggttcaacgcg ccctttgccatgacgggcgagaaggtggacctgaacgaggaggagacgatcctgatcatc cggcggctacacaaggtgctgcggcccttcctgctgcggcgcctcaagaaggaagtcgag gcccagctgcccgagaaggtggaatacgtgatcaagtgtgacatgtccgccctgcagcgc gtgctgtaccgccacatgcaggccaagggcgtgctgctgaccgacggctccgagaaggac aagaagggcaagggtggcaccaagaccctgatgaacaccatcatgcagctgcggaagatc tgcaaccacccctacatgttccagcacatcgaggagtcgttctccgagcacttgggattc accggcggcatcgtccaaggcctggacctgtaccgcgcctccggcaagttcgagctcctc gacaggatcctgcccaagctgcgcgcgaccagccacaaggtgctgctgttctgccagatg acttccctcatgaccatcatggaggactactttgcctaccgcggcttcaagtacctacgg ctcgacggaaccaccaaggccgaggaccggggcacgctcctcaagacgttcaacgagccg ggctcggagtatttcatcttcctgctcagcacccgcgccggggggctgggcctcaaccta cagtcagccgacacggtcatcatcttcgacagcgactggaacccccaccaggcccctggc tggtctgttttgccgggtgctggctggtctgttttcccactgttgaccctcaaggccatc gaggagggcacgctggaggagattgaagaggaggtccggcagaagaagtcgtcgcggaag cgcaagcgggacagcgaggccggctcctccacgccgaccaccggcacgcgcagccgcgac aaggacgaggagagcaagaggcagaagaagcgcgggcggccgccggccgagaagctgtcc ccgaacccgcccagcctcaccaagaagatgaggaagatcgtggacgcggtcatcaagtac aaggacagtagcagcggacggcagctcagcgaggtcttcatccagctgccctcccgcaag gagctgcccgagtactacgagctcatccgcaagcccgtggacttcaagaagatcaaggag cgcatccgcagccacaagtaccgcagcctgggcgacctggagaaggacgtgctgctgctg tgccagaacgcgcagaccttcaacctggagggctccctgatctacgaggactcgatcgtg ctgcagtccgtgttcacgagcgtgcggcagaaggtggagaaggaggaggagagcgagggc gaggagagcgaggaggaggaggaggccgaggaggaaggctccgattcgacctcgcgctcc gtcaaggtcaagatcaagctgggccgcaaggagaaggcgcaggagcggctcaagggcgcg cggcggaggccgggccggggctcgagggccaagcccgtggtcagtgaggaggacagcgac gaggagcaggacgaggatcgctccggaagcggcagcgaggaagactga

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