Ochotona princeps (American pika): 101516209
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Entry
101516209 CDS
T07609
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi03015
mRNA surveillance pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101516209 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
101516209 (EIF4A3)
03015 mRNA surveillance pathway
101516209 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101516209 (EIF4A3)
03041 Spliceosome [BR:
opi03041
]
101516209 (EIF4A3)
03009 Ribosome biogenesis [BR:
opi03009
]
101516209 (EIF4A3)
03012 Translation factors [BR:
opi03012
]
101516209 (EIF4A3)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101516209 (EIF4A3)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101516209 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
101516209 (EIF4A3)
Spliceosome [BR:
opi03041
]
Complex C
Other components
EJC/TREX
101516209 (EIF4A3)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Helicases
101516209 (EIF4A3)
Translation factors [BR:
opi03012
]
Eukaryotic type
Initiation factors
eIF-4
101516209 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
101516209
NCBI-ProteinID:
XP_004593079
LinkDB
All DBs
Position
19:1236697..1269793
Genome browser
AA seq
356 aa
AA seq
DB search
MTPQRSSASLDGLVHVTYLSLEGVQLSQSGTGKTATFSISVLQCLDIQVRETQALILAPT
RELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRS
LRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTD
PIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTE
KMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP
NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccccacagcggtcctcagcctccttggatgggttggtccatgtcacctacctgagc
ctggaaggtgtgcagctgtcacagtctggtacaggcaagacggccaccttcagtatctct
gttctccagtgcctggacattcaggtcagggagacccaagcattgatcttggcacccaca
agggagttggctgtgcagattcagaagggtctgcttgccctcggagactacatgaacgtc
cagtgccacgcctgcatcgggggcaccaacgtgggcgaggacatccggaagcttgactat
gggcagcacgtggtggctggcacgccggggcgggtctttgatatgattcgacgcagaagt
ttgaggacccgcgccatcaagatgctggtgttggatgaagcggatgaaatgcttaacaag
ggtttcaaggagcagatttacgacgtgtacaggtacctgcccccggccacccaggtggtc
ctcatcagtgccacgttgccgcacgagatcctggaaatgaccaacaagttcatgacagac
cctatccgcatcttggtgaagcgtgatgagttgactctggaaggcatcaagcagtttttt
gtggcagtggaaagagaagagtggaagtttgacaccctgtgtgacctctacgacacgctc
accatcacgcaggccgtcatcttctgcaacaccaagaggaaggtggactggctgacggag
aagatgcgggaggccaacttcacggtgtcctccatgcacggggacatgccgcagaaggaa
cgcgagtccatcatgaaggagttccgctccggcgccagccgggtgctcatctccactgac
gtctgggcccggggcctcgacgtcccccaggtgtccctcatcatcaactatgacctgccc
aacaacagagagctgtacatacacagaattgggcggtcagggcgctatggccgcaagggt
gtggccattaactttgtgaagaatgacgacattcgcatcctgcgggacatcgagcagtac
tactcgacacagatcgatgagatgcccatgaacgtcgctgacctcatctga
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integrated database retrieval system
