Ochotona princeps (American pika): 101516223
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Entry
101516223 CDS
T07609
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101516223 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101516223 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101516223 (USP5)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101516223 (USP5)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101516223 (USP5)
Ubiquitin system [BR:
opi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101516223 (USP5)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101516223 (USP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_3
UBA_4
Motif
Other DBs
NCBI-GeneID:
101516223
NCBI-ProteinID:
XP_004596447
LinkDB
All DBs
Position
8A:23481525..23494186
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AA seq
858 aa
AA seq
DB search
MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVER
HFNKTGQRVYLHLRRTRRPKEEDSASGTGDPPRKKPTRLAIGMEGGFDLTEDKFEYDEDV
KIVILPDYLEIARDGLGGLPDIVRDRVSSAVEALLAADSASRKQEVQAWDGEVRQVSKHA
FNLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRET
GYPLAVKLGTITPDGADVYSYDEDDMVLDPSLPEHLAHFGIDMLKMQKTDKTMTELEIDM
NQRIGEWELIQESGVPLKPLFGPGYTGIQNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEK
IFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESNDREQAPEQKEVQDGIAPRMFKAL
IGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYT
QRVDYIMQLPVPMDAALNKEELMEYEEKKRQAEEEKLPPPELVRAQVPFSSCLEAYGAPE
QVDDFWSTALQAKSVAIKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDIS
QLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDEDSFCSPHLSSPTSPMLDESVV
IQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAA
EPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSA
ADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCAS
EKPPKDLGYIYFYQRVAS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagtgaggaggcgctgctgtcagtattaccgacgatccgggtccctaag
gctggagaccgggtccacaaagacgagtgcgctttctccttcgacacaccggagtccgag
ggcggcctgtacatctgcatgaacacgttcctgggcttcgggaagcagtatgtggaaagg
cacttcaataagactggccagagggtttacctgcacctgcggcgaacccggcgtccgaaa
gaagaggacagtgcttcaggcactggagacccaccccgcaagaagcccacccggctggcc
attgggatggaaggcggctttgacctcaccgaggacaagtttgaatatgacgaggatgtg
aagattgtcattttgccagattacctggagattgcccgggatggcttggggggcctgcct
gacatcgtcagagaccgggtgagcagcgcggtggaggccctgctggcagccgactcggcc
tcccgcaagcaggaggtgcaggcctgggacggggaggtccggcaggtctctaagcacgcc
ttcaacctcaagcagctggacaaccctgcacgcatccccccctgtggctggaaatgctct
aaatgtgacatgagagagaacctgtggctgaacctgacagacggctccatcctctgcggc
cggcgctacttcgatggcagcgggggcaataaccacgccgtggagcactacagggagacg
ggctacccactagcagtcaagctgggcaccatcacgcctgatggggctgatgtgtactcg
tacgatgaggacgacatggtgctggaccccagcctgcctgagcacctggcacacttcggc
attgacatgctgaagatgcagaagacagacaagaccatgaccgaactggagatagacatg
aaccagcggattggcgagtgggagctgatccaggagtcgggggtaccactgaagccgctc
ttcgggcccggctacaccggcatccagaacctgggcaacagctgctacctcaactccgtg
gtccaggtgctcttcagcatccctgacttccagaggaagtatgtggacaagctggagaag
atcttccagaatgccccgacagaccccacccaggacttcagcacccaggtggccaagctg
ggccatggcctcctctcgggggagtattccaagccagccccagagtcaaatgacagggag
caggccccagaacaaaaggaggtccaggatggcattgcccctcggatgttcaaggccctc
attggcaagggccatcccgagttctccaccaaccggcagcaggatgcccaggagttcttc
cttcatctcatcaacatggtggagaggaattgccggagctctgaaaaccccaatgaagtg
ttccgcttcttggtggaggagaagatcaagtgcctggccacggagaaggtgaagtacacg
cagcgcgtggactacatcatgcagctgcctgtgcccatggacgcagccctcaacaaagag
gagctcatggagtacgaggagaagaagcggcaggccgaggaggagaagctgcccccgcca
gagctggtccgagcccaggtgcccttcagctcctgcctggaagcctatggggcgcccgag
caggtggacgacttctggagcacggcgctgcaggccaagtcagtggccatcaagactaca
cggtttgcctcattccccgactacctggttatccagatcaagaagttcaccttcggcctg
gactgggtgcccaagaagctggatgtgtccattgagatgccagaggagctggacatctcc
cagctgcggggtactgggctgcagccaggagaggaggagctgcctgacattgccccaccc
ctggtgaccccagatgagcccaaaggtagccttggtttctatggcaacgaagacgaagac
tccttctgctcccctcacctctcctctccgacatcacccatgctcgatgagtcggtcgtc
atccagctggtggaaatgggcttccccatggatgcctgccgcaaggccgtctactacacg
ggcaacagtggggctgaggctgccatgaactgggtcatgtcgcatatggatgatccagat
tttgcaaaccccctcatcctgccgggctccagcgggcctggctcaaccagcgcagcggcc
gagcccccacccgaggactgcgtgaccaccatcgtttccatgggcttctcccgggaccag
gctctgaaagccctgagggccacgaataatagcttagagcgggctgtggactggatcttc
agccacatcgacgacctggatgcagaggccgccatggacatctccgagggccgctcagcc
gccgactccatctctgaatctgtgccagtgggacccaaagtccgggacgggcccggaaag
tatcagctctttgccttcattagtcacatgggcacctctaccatgtgtggtcactacgtc
tgccacatcaagaaggagggcaggtgggtgatctacaacgaccagaaagtgtgtgcctcc
gagaagccgcccaaggacctgggctacatctatttctaccagagagtggccagctaa
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