Ochotona princeps (American pika): 101516330
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Entry
101516330 CDS
T07609
Symbol
LAMA3
Name
(RefSeq) laminin subunit alpha-3 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04382
Cornified envelope formation
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi05145
Toxoplasmosis
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101516330 (LAMA3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101516330 (LAMA3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101516330 (LAMA3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101516330 (LAMA3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101516330 (LAMA3)
09162 Cancer: specific types
05222 Small cell lung cancer
101516330 (LAMA3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101516330 (LAMA3)
09174 Infectious disease: parasitic
05146 Amoebiasis
101516330 (LAMA3)
05145 Toxoplasmosis
101516330 (LAMA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_I
Laminin_G_1
Laminin_II
EGF_laminin
Laminin_G_3
EGF_LMN_ATRN
AAA_lid_13
Baculo_PEP_C
DUF948
Motif
Other DBs
NCBI-GeneID:
101516330
NCBI-ProteinID:
XP_012786938
LinkDB
All DBs
Position
9:complement(40762810..40827380)
Genome browser
AA seq
1728 aa
AA seq
DB search
MPPAVRRSAWCFLRLWIFGATLAQCLGYNSQQQRAQLLQPPGQSQLQVSFAEFRPSQGCS
SGYYRDDRGGLYPGRCVPCNCNGHSNRCQDGTGICINCQHNTAGDHCERCKEGYYGNAVV
GACSVCPCPHTNSFATGCVVNGGNVRCSCKPGYTGVRCERCAPGYFGNPPKFGGSCQPCN
CNSNGQLGSCDPVTGDCISQHNELKDSSPGEECDDCDSCVTTLLNDLAAKSEELHLVKSQ
LQGLRVGMGALEQMRHLETQTKELRNQLLNYHSTISSRRSDIDGLEKELSNLNREFETLQ
EKAQVNSRKAQTFYASLDQTTQRAKELDVKIQNVIRNVNILLKQISGENGEGNYLPSGDF
SRELAEAQRMMRELRSRNFGNQLREAEAEKRAAQLMLSQISNLLANHREDSNGLAKSLWD
SLNEYEAKLRDLRAALQEASAQAKQAANLNQDNEKTLEDIKRHTKEISSLQSDFTKFLST
ADASLLQTNIVLQRLEESQKEYEKVAATLNEARQELSDRVRALSRSASKTSLVVEAENHA
RSLQELARQLEEIKRNASGDELVRRAVDAATAYENILNAIKAAEDAANKATSASESALQT
VIKEDLPAKAKTLSSESDQLLKEAKITQKKLQQEISPALSNLKQTLQTVTSQREGIDTNI
TALRAELHGIQRGDIDEVISITKNTVKKTNDITNEVLDGLHPIQTDVERIKDTYGSARSE
DFNKALTDADSSVKKLTRNLPDLLSKIESINQQLLPLGNISDNVDRIRELIQQARDAANK
VTVPMRFNGKSGVEVRLPTDPGDLKGYTSLSLFLQRPDSRENGGTEDMFVMYLGNKDASR
DYIGMALIDNRLTCIYNLGDREAELQVDQILTESETQEAVMDRVKFQRIYQFASLNYTKE
ATSSKPKPPQFYDIESGTSNTLLNLDPENVVFYVGGYPSDFILPSRLRLPPYKGCIELDD
LNENVLSLYNFKKTFNLNTTEVEPCRRRKEESDKNYFEGTGYARIRTQPYSQILTFAQTI
QTTVDRGVVFFAENQDRFISLNVEDGSFMVRYRLDSGPPKEKGIQGTINNGRDHSIQIIV
RKVQKQILISMHSQSIQIEGDLFDFSTYYLGGIPIAIRERLNISTPAFRGCMKNLKKTTG
VIRLNDSVGVTKKCSEDWKLVRSASFSKGGYLSFSNLGLPLPNHYQTSFGFQTFQPSGIL
LNHQTRTSSLQVTLEDGHIEVSTKDSSGTIFRSPQTYVDGLLHYVSVISDSAGLHLLVDD
QPLRSSQKLQGFANSQQSLRLGGSSFEGCISNVFVQRLSPSPEVLDLTSRSNKQDVALGS
CSLNQPPFLMLLKGSARLNKVDAFDINQPLHDTPVASLKNMEVWKDARSCPPLPRVQPSH
GALRFGDSPTSHLLFKLPQELLKARSQFTVDMQTTASRGLVFYTGMENSFLALFLTKGRL
IFALEAGGKKLRLKSKEKCNDGRWHTVVFGQDGGKVHLVVDGLRARGGSLPGNSTVSVGA
SVFLGAPSSGKPKSLPQNSFVGCLKNFQLDLMPLDTPSANAGVTPCLGGSLEKGIYFSQE
EGGHVLLANSVSWGPEFKIVFSIRPRSLTGILIHIGSQPKQHLSVYMEAGQVTASVDSGT
RGVSTSVMPKQSLCDGQWHSVAVTIKQHILHLQLDADNSYTAGQLTFLPSQEPLYIGGIP
ANLQSQKLPVWKSFFGCLKNMHINHNPVHVTEASEVRGPVSLNGCPDH
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgccccctgcagtgaggcggtcagcctggtgcttcctgaggctctggatctttggggca
accttggcgcagtgtctgggatacaattcacagcaacaaagggcacagcttcttcagcct
ccgggtcaaagtcagctacaagtaagctttgcggagtttagacccagccagggttgtagt
tcgggatactatcgggatgacagaggaggcttgtaccctggacggtgtgtgccctgcaat
tgtaacggacattcaaatcgatgccaggatggcacaggaatatgtattaactgtcagcat
aacacggcgggggaccactgtgagcgctgcaaggagggttactatgggaacgcggtcgtc
ggagcctgtagtgtctgcccatgtcctcacaccaacagttttgccaccggctgtgttgtg
aatgggggaaacgtgaggtgctcctgcaaacccgggtacacaggagttcggtgtgaaaga
tgtgcgccaggatattttgggaatcccccaaaatttggagggagctgccaaccatgcaat
tgtaacagcaatggccagttgggcagctgtgaccccgtgactggagattgcatcagccag
cacaatgaactcaaagacagcagcccaggggaagaatgtgatgactgtgatagctgtgtg
acaaccctcctgaatgacctggctgccaagagtgaggaactccatctggtcaagtcgcag
ctgcagggcctgcgtgttggcatgggtgctctggagcagatgaggcacctggaaacccag
accaaggagctgaggaatcagttgctcaactaccattctaccatttcaagtcgtagatca
gacatagatggcctggaaaaagagctgagtaatctgaatcgtgaatttgaaactttgcaa
gaaaaggcacaagtaaattccagaaaagcacaaacattctatgccagccttgatcagaca
acccagagagccaaagagctggatgtgaagattcaaaatgtcatccggaacgtgaacatc
ctactgaaacagatctctggggaaaatggagaaggaaactacttaccttcaggagatttt
tccagggaattggctgaggcgcagcgcatgatgagggagctacggagccgaaactttggc
aaccaactgagagaagcagaagcggagaagagagcagctcagctcatgctgagtcagata
agcaacttgctggcaaaccaccgagaggatagcaacggactagccaagagtctatgggat
tcattaaatgaatatgaagctaaactccgtgacctgcgggctgcactacaggaggcatcc
gcccaagcaaagcaggccgccaacctcaaccaagacaacgagaagactctggaagacatc
aagagacatacgaaagaaatcagctccctgcagagtgacttcaccaagtttctcagcact
gcagatgcctctttgctgcagaccaacattgtgctgcagcggctggaggaaagccagaag
gaatatgaaaaagtcgctgctactttaaatgaagcaaggcaagaactaagtgacagagtg
agagcactttccagatctgccagcaaaacatccctggtggtggaagccgagaatcacgcc
aggtctctgcaggagctggcgaggcagctggaagagatcaagaggaacgccagtggggat
gagctggtgcgccgtgctgtggacgctgccactgcctatgaaaacatcctcaacgccatc
aaagcggccgaggatgctgccaacaaggccaccagcgcgtcagagtctgccctccagaca
gtgataaaggaagaccttccagcaaaagctaagaccctgagttctgagagtgatcaactg
ttaaaggaagccaagataacacagaagaaactacagcaagaaatcagtccagctctcagt
aacctcaagcaaacgctgcaaacggtgacatctcagagagaagggatagataccaacatt
accgctctccgtgctgagctccatgggatacagagaggtgacatcgatgaggtgatcagt
atcacgaagaacacagtcaaaaagaccaatgacatcacaaacgaggttcttgatgggctg
caccccatccagacagatgtggaaaggattaaggacacttatgggagcgcacggagtgaa
gacttcaacaaggccctgacggacgcagatagctcagtgaaaaaattaaccagaaacctg
cctgaccttttgagcaaaattgaaagtatcaaccaacagttgttgcccctgggaaacatc
tctgacaatgtggaccggatacgggagctaattcagcaggccagagatgcagcaaacaag
gtcactgtccccatgagattcaacgggaagtctggcgtggaagtccgactccccactgat
ccgggagatttaaaaggatacacttctctgtctctgtttctccaaagacctgactcaaga
gaaaatggcgggactgaagatatgttcgtcatgtacctcggaaataaagatgcttccagg
gactacataggcatggcactcatagacaaccgcctcacgtgtatctataacttgggagac
cgtgaggctgaactccaggtggaccagatattgaccgagagtgagacccaggaggcagtc
atggaccgggtgaaatttcaaagaatctatcaatttgcaagtctcaattacaccaaagaa
gccacatccagtaaaccaaagccacctcaattctacgacatagagagtggaactagcaac
accctccttaatctggatccggaaaatgtcgtgttctatgttggaggttacccatctgat
tttatacttcccagtagactaagactcccgccatataaaggttgtattgaattagatgac
ctgaatgaaaatgttctgagcttatacaacttcaaaaaaactttcaatctcaatacaact
gaagtggaaccctgcagaaggagaaaggaggagtcggacaaaaattactttgaaggtaca
ggctatgctcgaattcgaactcaaccctactcccagatcctcacctttgcacagacaatt
cagaccactgtggacagaggtgtggtgttctttgcagaaaaccaggaccgcttcatctct
ctcaacgtggaagatggcagtttcatggtgcggtacagactggattcgggaccccccaaa
gagaagggtattcaaggcaccatcaacaacgggagggaccattcgattcagatcatcgtt
agaaaagtccagaagcaaatattgatcagcatgcattctcaaagcattcaaattgaaggg
gacctatttgacttcagcacatattacctggggggaattccaattgccatcagagaaaga
ttaaacatttctacacctgcttttcgaggctgcatgaagaatctgaagaagaccactgga
gtcattcggttgaatgactctgtcggagtaaccaaaaagtgctccgaagactggaagctc
gtgcgatcggcctcattctccaaaggaggatatttgagtttctctaatttgggtctccca
ttgccgaaccactaccagacctcatttgggttccagacgtttcagcctagtggtatatta
ttaaatcatcagacacggacgagcagcctacaggtcactctggaggatggtcatattgaa
gtgagcaccaaggatagcagcggcacaatttttcgatctccacaaacatacgtggacggc
ctgctgcactacgtgtctgtcataagtgacagtgctggcctccatcttcttgttgatgat
cagcctctgaggagcagccagaagctgcaaggctttgcaaattcccagcagtctctgcgc
ctgggcgggagttcttttgagggttgcatcagcaatgtttttgtgcagagattatcgccg
agtcctgaagtcttagatctgaccagtagatctaacaagcaagacgtggccctgggaagc
tgcagtttgaatcaacctccttttctaatgctgcttaaaggttctgcaaggttgaacaag
gtcgatgctttcgatatcaaccagccattgcatgacacaccagtggcctctctgaagaac
atggaggtatggaaagatgccaggtcttgcccaccacttcccagggtgcagcccagtcat
ggagccctccggtttggggacagtcccaccagccacttgctattcaagcttccccaggag
ttgctgaaagccaggtcacagttcactgtggacatgcagacaacagcttccagggggctg
gtgttctacacgggcatggagaactcctttctggcccttttcctgacaaagggacgcctg
atctttgcactggaggctggaggaaaaaaactgcggctcaagagcaaagagaaatgcaat
gatggccggtggcacacggtggtgtttgggcaagatggaggaaaggtgcacttggttgtg
gatggcctgagggcacggggaggaagtctgcctggaaactccactgtcagtgttggagcc
tcggttttcctgggagctccttcgtcagggaaaccaaagagcctcccccaaaacagcttt
gtgggatgcctgaagaacttccaactggatttaatgcccttggataccccatctgcaaat
gccggggtgactccatgcttgggaggctccttggagaaaggcatttatttctcccaagaa
gaaggaggtcatgttctcttggccaactctgtgtcatggggaccggaatttaaaattgtt
ttcagcattcgcccaagaagtctcactggaatcctaatacacatcggaagtcaacccaag
caacatctgagtgtttatatggaggcaggacaggtcacagcctctgtggacagtgggaca
agaggggtctcaacatcggtcatgccaaagcagtctctgtgtgatggacagtggcactca
gtggcagtgaccatcaaacaacacatcttgcacctgcaactggatgcagacaacagctac
acagctggacagctcaccttcctgccttcccaagagccactgtacattggaggtattcca
gccaatttgcagtcccagaagctgccagtgtggaaatcatttttcggttgtctgaagaat
atgcacatcaaccacaaccctgtccatgtcacggaagcctcagaagttcgggggcctgtc
agtctgaatggctgccctgaccactga
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integrated database retrieval system
