Ochotona princeps (American pika): 101516510
Help
Entry
101516510 CDS
T07609
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101516510 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opi01007
]
101516510 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101516510 (RARS1)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101516510 (RARS1)
Enzymes [BR:
opi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
101516510 (RARS1)
Amino acid related enzymes [BR:
opi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
101516510 (RARS1)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101516510 (RARS1)
Prokaryotic type
Other AARSs
101516510 (RARS1)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
101516510 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Cnn_1N
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
101516510
NCBI-ProteinID:
XP_004587506
LinkDB
All DBs
Position
3A:complement(8908170..8945169)
Genome browser
AA seq
660 aa
AA seq
DB search
MEALVAQCTARLLLQEKVIQSLSAEINQLRNRAYSETSPQLAQLHEENLKLKYRINILRK
SLQAERNRPTKNMININSRLQEVFGCAVKAAYPDLENPPVFVTPSQQAKFGDYQCNSAMA
IGQMLKTKEQKVNPREIAENITKHLPENEYIEKTEIAGPGFINVHLRKDFVSEQLSNLLV
NGVHLPAVGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYEVLRLNHVGD
WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSK
NPDILKAWNLICDVSRQEFNKIYDALDITLIERGESFYQDRMDDVVKEFEEKGFVQVDDG
RKIVFVPGCSVPLTVVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDSGQSVHFQTIF
AAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLVDLLEEGLKRSLDKLKEK
ERDKVLSVEELKAAQMSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANVDEETLRKAARETKIVLEHEKEWKLGRCILRFPEVVQKILDDLFLHTLCDY
IYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVASIMAKGFAILGIKPVQKM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcgtggctcagtgcaccgcgcggctgctgctgcaggagaaagtcattcag
tctctgagtgccgaaattaaccagttgagaaaccgtgcctactcggaaacttcgccgcag
ctggctcagctgcatgaagaaaatttaaaattaaaatatcgcataaatattctccgaaag
agtcttcaagcagaaaggaatagaccgaccaaaaatatgattaacatcaacagccgtctt
caggaagtctttggctgtgccgtaaaggccgcctacccagatttggaaaatcctcctgtg
ttcgtgacaccgagccagcaggccaagtttggggactaccagtgtaacagtgctatggct
atcggccagatgctgaaaaccaaggaacagaaagtgaatccgagggaaatcgctgaaaac
attaccaaacatctcccagagaatgagtatattgaaaaaactgaaattgctggtcctggt
ttcattaatgtccatttaaggaaggattttgtgtcggaacagttgagcaaccttttggtg
aatggagttcatctgcctgccgttggagagaataaaaaggttgtggtggacttctcttct
cccaacatagctaaagagatgcacgtgggccacctgaggtctaccatcatcggggagagc
atgtgtcgcctcttcgagtttgcaggatatgaggtgctcaggttaaatcatgtcggagat
tgggggacccagtttggcatgctgattgctcacttgcaggataaatttccagattatcta
acagtttcacctcctatcggggatctccaggcattttataaggaatccaagaagagattt
gatactgaggaagaatttaagaagcgggcgtaccagtgtgtggttcttctgcagagtaaa
aaccccgatattctgaaagcctggaacctgatctgtgatgtgtcccgtcaagagtttaat
aaaatctacgatgcactggacatcactctgatagagagaggagaatccttctatcaagat
aggatggatgatgttgtaaaagaatttgaagagaaagggtttgtgcaagtggatgacggc
aggaagattgtgttcgtccccggctgctctgtcccgttaaccgtcgtgaagtcagacgga
ggttacacctatgatacatctgatctggctgctattaaacaaaggctgtttgaggaaaaa
gcagatatgatcatctatgtggtggacagtgggcagtccgtgcacttccagacgatattt
gctgccgctcagatgattggttggtacgaccctaaggtgactcgcgtgtcgcacgccgga
tttggagtggtgctcggagaagacaagaagaagtttaaaacgcgctcgggtgaaacggtg
cgcctcgtggaccttttggaggagggtctgaaacgatccctggacaagctgaaggagaag
gaaagagataaggtgttgagtgtggaggaactgaaggctgctcagatgtccgtggcgtat
ggctgtatcaagtacgccgacctgtcccataaccgcttgaacgactacatcttctccttc
gacaagatgctggacgaccgcggcaacacggcggcctacttgctgtacgccttcaccagg
atcaggtccatcgcccgtctggccaacgtggatgaagagacgctgcggaaggccgcccgg
gagacgaagatcgtgttggagcacgagaaggagtggaagctgggccggtgcatcctgcgg
tttcccgaggtcgtgcagaagattctggatgacctgtttctgcacacgctgtgcgattat
atctacgagctggccacgactttcaccgagttctacgacagctgctactgtgtggagaaa
gacaggcagaccggcaaggtgctgaaggtcaacatgtggcggatgctgctgtgcgaagcg
gtggcttccatcatggccaagggctttgccatcctggggataaagcccgtgcagaagatg
tga
DBGET
integrated database retrieval system
