Ochotona princeps (American pika): 101516577
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Entry
101516577 CDS
T07609
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101516577 (GEN1)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101516577 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
101516577
NCBI-ProteinID:
XP_012781649
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Position
2:12437922..12467702
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AA seq
866 aa
AA seq
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MGVNDLWQILEPVKEHVNLKELAGKTIAVDLSLWVCEAQAVKKMIGTVLKPHLRNLFFRI
SYLTQMDVKLVFVMEGEPPRLKADVINKRNQIRYGPSGKTSQKMERSHFKLVLQECLDLL
ECLGVPWVQAAGEAEAMCAHLNAAGQADGCFTNDGDAFLYGAQTVYRNFTMNAKDPHVDC
YTMASIKDKLGLDRDTLVGLAVLLGCDYLPEEYRKPAHCSLCSHPGSCDDHERNGCRLCK
SGKSCEPHGDEYCCPCEWHRTQHHSQPAGIEESIKKKACQCEGFPFQEVIEEFLLNKDKL
VKKICPQRPDLLLFQRFTLEKMEWPSHYASEKLLVLLTRYDMVERKLGRRNSNQLRPVRL
MKYQDSNPVYLFHCVFNFAEHYVTEDGQKGDSVVLTIEEESLFEAAYPEIVAVYKLQKLE
IKGKQKRGMKIKHRKNNLPDSDDAVSVQSQLTLKPACEIFPKQNSKLNLEILPIPALSQE
AISASLNNLLLPEDDSCLNTHEQFISSPRLLDTQQKNKAATEYPTSEAGQHNSLNDNRSV
IADLHLSTIDWEGTSFSNSPAIQRNTVSCDLKSTLTAELSTPTDSYENIPEQLCESEQFA
SNMNEALDWDLQKISSEEHIISSISNLCLKDLPLRERLLIKSSFPQNNVQPDADLKALSL
ISRKESCVTKNSFDYSPHLSQDLPGIHLQNEPRNSEMLKDQLLQENCEITSSAALSDKNP
TAFRAGPPNITSNHSRKFDMPATKKAVMPRSVCLERHSSDDESTPVFERAKFSTNKINHG
FQNNLTAQFKENDHNNLPNPKLLMKETEKYYKSFKTSRNEEDSSSGPGKKLLSFPQCHQK
GNHNSGVWLDSPPPLSQRLKLKFQNI
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacctgtggcaaattctagagcctgttaaggaacacgtgaacctaaag
gagcttgctgggaaaaccattgcagttgatctgagcctctgggtgtgtgaagcacaggca
gtcaaaaaaatgattggaactgtcctgaagccccacctcagaaacctgttttttcgtatc
tcctatttaacacaaatggatgtaaaattagtgtttgttatggaaggagagccaccaagg
ctaaaagctgatgtcataaacaagaggaatcaaattcggtatggaccttctggtaaaacg
tctcagaaaatggagagatcacattttaagctggttttacaagagtgtctggatctgctg
gagtgcctaggagtgccctgggttcaggcggccggggaagcggaagccatgtgcgcccac
ctcaacgcagcgggccaggcagacggctgctttaccaacgacggagacgctttcctctat
ggggcccagaccgtttacaggaatttcactatgaatgcaaaggacccccacgttgattgt
tacaccatggcatctatcaaggataagctgggcttggacagggacactctggttggactg
gcggttcttctcggctgtgattatctcccggaggaatacagaaaaccggctcattgctcg
ctgtgttcccacccaggctcatgtgatgatcatgaacggaatggatgcagattatgtaaa
agcggtaagtcctgtgagccacatggtgatgaatactgctgtccctgtgagtggcatcgg
acacaacatcacagccagcctgccggaatcgaggaaagtataaagaagaaagcttgccag
tgtgaaggattcccattccaagaggtcattgaagaattccttttgaacaaggataaactg
gtgaagaagatctgcccccagaggcctgatttgttgctgtttcagagatttactcttgaa
aaaatggagtggcccagtcactatgcaagtgagaaattgctggtactcttgactcgatat
gacatggtagaaagaaagcttggcagacggaactcaaatcaactacggccagttcgcctc
atgaaataccaagatagtaacccagtttacctatttcactgtgtttttaactttgcagaa
cattatgttacagaagatgggcaaaaaggagactcggttgtattaacgatcgaagaagaa
tcattgtttgaagcagcatatccagagattgttgctgtttacaaattacagaagttagaa
attaaagggaagcaaaaaaggggtatgaaaattaagcacaggaaaaataatttaccagac
tcggatgatgcagtgagtgttcagtcacaactgactttaaaacccgcttgtgaaatcttt
cctaaacagaattccaagctgaatttggaaattcttcccattcctgcattatcacaggaa
gccatctctgcctcattgaataacttacttttacctgaagatgattcctgtttgaatacc
cacgaacagtttatatcctccccaagacttttggatacccaacaaaagaacaaagctgca
actgaatatccaacttcagaagctggtcaacacaattccttaaacgacaataggtcagta
attgctgatctgcacttgagcaccattgactgggaaggcacttctttcagtaattcccca
gctattcaaaggaacactgtctcttgtgatttaaagtcaacacttacagcagagctgtca
acccctactgattcttatgaaaatatcccagaacaattatgtgaatcagagcagttcgcc
tcaaacatgaatgaagctttggattgggatctccaaaagattagttctgaagagcatatc
atttctagcatttccaatttatgtctaaaggatttgcctttaagggaacgactactgata
aagtcatcatttcctcagaataatgtacaaccagatgctgacctgaaagctttgtcccta
attagtagaaaagaatcttgtgtcactaagaatagttttgactattcaccacatctttct
caggatcttccaggaatccatttgcaaaatgaacccagaaatagtgaaatgttaaaagac
caactacttcaagaaaactgcgaaataacctcttctgcagctctttctgacaaaaatcca
acagcatttagagctggaccaccaaatataacttcaaatcacagtagaaaatttgatatg
ccagccaccaagaaagctgtaatgccgagaagcgtttgccttgagagacattcatctgat
gacgaaagtaccccagtgtttgagagagctaagttctcaacaaacaaaataaaccatggt
tttcagaataatctcacagcccaattcaaagaaaatgaccacaacaacttacctaatcct
aaactgttgatgaaagaaactgaaaaatattacaaatctttcaaaacatctagaaatgaa
gaagattcttcctctggcccaggaaaaaagctcctgagttttccccaatgtcatcagaaa
gggaatcacaactccggtgtttggctggacagtccacctcctttatcccagagattaaaa
ctcaagttccaaaacatttga
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