Ochotona princeps (American pika): 101516583
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Entry
101516583 CDS
T07609
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4 isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03050
Proteasome
opi05010
Alzheimer disease
opi05012
Parkinson disease
opi05014
Amyotrophic lateral sclerosis
opi05016
Huntington disease
opi05017
Spinocerebellar ataxia
opi05020
Prion disease
opi05022
Pathways of neurodegeneration - multiple diseases
opi05165
Human papillomavirus infection
opi05169
Epstein-Barr virus infection
opi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101516583 (PSMC1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101516583 (PSMC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101516583 (PSMC1)
05165 Human papillomavirus infection
101516583 (PSMC1)
09164 Neurodegenerative disease
05010 Alzheimer disease
101516583 (PSMC1)
05012 Parkinson disease
101516583 (PSMC1)
05014 Amyotrophic lateral sclerosis
101516583 (PSMC1)
05016 Huntington disease
101516583 (PSMC1)
05017 Spinocerebellar ataxia
101516583 (PSMC1)
05020 Prion disease
101516583 (PSMC1)
05022 Pathways of neurodegeneration - multiple diseases
101516583 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
opi03051
]
101516583 (PSMC1)
Proteasome [BR:
opi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
101516583 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
101516583
NCBI-ProteinID:
XP_012782188
LinkDB
All DBs
Position
20:complement(8330001..8342363)
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggccatgggcctggaggaggcaagaaggacgacaaggac
aagaaaaagaaatatgaaccgcctgtgccaaccagagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaagctgccactggtgacacctcacactcagtgccggcta
aaattattgaagctagagagaattaaagactatctactcatggaggaagaattcatcaga
aaccaggagcagatgaagccgttagaagaaaagcaggaggaggaaaggtctaaggtggat
gacctgagagggaccccgatgtcagtaggaaccttagaggaaatcatcgatgacaaccac
gctatcgtgtcaacatccgtgggctcggagcactacgtcagcatcctgtcctttgtggac
aaggacctgctggaacccggctgctccgtcctgctcaaccacaaggtgcacgctgtgata
ggagtgctgatggatgacacggatcccctggtcacggtgatgaaggtggaaaaggcccct
caggagacctacgccgacattggggggctggacaaccagatccaggaaattaaggaatct
gtggagcttccgctgacccatccagaatattatgaagagatgggaatcaagccccccaag
ggggtcattctctacggtccacctggcacaggtaaaaccctgttggcaaaagcagtggca
aaccaaacctcagctactttcttgagagtggtcggctctgaacttatccagaagtacctt
ggcgacgggcccaaactcgtgcgggagctgtttcgtgttgctgaagaacacgcaccatcc
atcgtatttattgatgaaattgatgctattgggacaaaaagatacgactcaaattctggt
ggggagagagaaatccagcgcacaatgctggagctgctcaaccagctggatgggtttgac
tcgagaggagacgtgaaggtgattatggccacaaaccgaatagaaactttggatccagca
cttatcagaccaggccgcatcgacaggaagattgagttccccctgcctgacgagaagacc
aagaagcgcatctttcagattcacacgagcaggatgacgctagctgatgacgtcaccctg
gacgacttgatcatggcgaaagatgacctctccggagcagacatcaaggccatctgcacg
gaagctgggctgatggccctgcgggaacgcaggatgaaagtcacgaatgaagacttcaag
aaatccaaggagaacgtcctctataagaagcaggaaggcacgcccgaggggctgtatctc
tag
DBGET
integrated database retrieval system
