Ochotona princeps (American pika): 101516589
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Entry
101516589 CDS
T07609
Symbol
PTPRT
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase T
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101516589 (PTPRT)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
101516589 (PTPRT)
Protein phosphatases and associated proteins [BR:
opi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
101516589 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
MAM
fn3
DSPc
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
ig
I-set
TM_ErbB1
Ig_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
101516589
NCBI-ProteinID:
XP_004586113
LinkDB
All DBs
Position
4A:complement(27034054..27709438)
Genome browser
AA seq
1442 aa
AA seq
DB search
MYLPLSLLSAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPMLDPAVPTGSFMMVNS
SGRASGQKAHLLLPTLKENDTHCIDFHYYFSSRDRSSPGALNVYVKVNGGPQGNPVWNVS
GVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLAHPCRKAPHFLRLQ
NVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHRRFSATVSVADTAQ
RSVSKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLWIKPNANSIIGDGP
IILKEVEYRTTTGTWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPGEGGTGPPGPPLTT
RTKCADPVHGPQNVEIVDIRARQLTLQWEPFGYAVTRCHSYNLTVQYQYVFNQQQYEAEE
VIQTSSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQTEEDVPGAVPLESIQGGPFE
EKMYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRGKVFKLRNETHHLFVGLYPG
TTYSFTIKASTAKGFGPPVTTRIATKISAPSMPEYDTDTPLNETDTTITVMLKPAQSRGA
PVSVYQLVVKEERLQKSRRAADIIECFSVPVSYRNASSLDSLHYFAAELKPANLPVTQPF
TVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGVTNIGNXLRTQSKAPMGSAQVTPGTP
LCLLTTGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSYSY
YLKLAKKQKETQSGAQREMGPVASADKPTAKLGTSRNEEGFSSSSQDVNGFTDGSRGELS
QPTLTIQTHPYRTCDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEG
QTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIA
TQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETE
PLAEYIIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGP
IVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDA
ILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLL
PRNHDKNRSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVAD
FWRLVFDYNCSSVVMLNEMDTAQLCMQYWPEKTSGCYGPIQVEFVSADIDEDIIHRIFRI
CNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCL
NGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQYKFVYEVALEYLS
SF
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacccttatctcttttgtctgcaggtggctgttcctttgatgagcactacagc
aactgtggttatagcgtggccctggggaccaatgggttcacctgggagcagattaacact
tgggagaaaccaatgctggacccagcagtgcccacagggtccttcatgatggtgaacagc
tctgggagagcctccggccagaaggcccaccttctcctgccaactctaaaggagaatgac
acccactgcatagatttccactactacttctccagccgcgacagatccagcccaggggcc
ttaaacgtctacgtgaaagtgaacggcgggcctcaggggaaccctgtctggaatgtatcc
ggggtcgtcaccgaaggctgggtgaaagcagagctcgccatcagcaccttttggccacac
ttctatcaggtgatatttgaatctgtctctctgaagggtcatcctggctacatcgctgtg
gacgaggtccgggtcctcgctcatccatgcagaaaagcacctcattttctgcgactccag
aatgtcgaggtgaacgtggggcagaatgcaacatttcagtgcattgctggtgggaagtgg
tctcaacatgacaaactttggcttcagcaatggaatgggagggacacagctctcatggtc
acccgtgtggtcaaccacaggcgcttctcagccacagtgagtgtggcagacacggcccag
cgcagcgtcagcaagtatcgctgtgtcatccgctctgatggggggtccggcgtgtccaac
tacgcggagctgattgtgaaagagcctcccacgcccatcgcgcccccggagctgctggcc
gtgggggccacctacctgtggataaagccgaatgccaattccatcattggggacggcccc
atcatcctgaaggaggtggagtatcgcacgaccactggcacctgggctgagacccacatc
gtggactcacccaactataagctgtggcacctggacccggacgtggagtacgagatccgt
gtgctgttaacacggccaggcgagggtggcacagggcccccggggcctcccctcaccacc
agaaccaagtgtgcagacccagtacatggcccacagaacgtggagattgtggacatccga
gcgcggcagttgaccctgcagtgggaaccctttggctatgcagtgacccgttgccacagc
tacaacctcacagtgcagtaccagtatgtattcaaccagcaacagtatgaggctgaagaa
gtcatccagacctcctcccactataccttgcgtggcctgcgtcccttcatgaccatccgt
ttgcggctcctgctgtctaaccctgagggtcggatggagagtgaggaactggtggtgcag
actgaagaggatgttccaggagctgttcccctggaatcaatccagggaggaccttttgag
gagaagatgtacatccagtggaaacctcccaatgagaccaatggggtcatcactctctat
gagatcaactacaaggctgttggctcactggaccccagcgcagacctctccagccagagg
gggaaggtgttcaagctccggaatgaaacccaccatctcttcgtgggcctgtacccaggg
accacctattccttcaccatcaaggccagcacagccaagggctttgggcccccagttacc
actcggatcgccactaaaatttcagctccatcgatgcccgagtatgacactgatactcca
ctgaatgaaacagacacgaccatcacagtgatgctgaagcccgcccagtcccggggagcc
cctgtcagtgtttatcagctggttgtcaaagaggagcgactgcagaagtcacggagagca
gctgacatcattgagtgcttttctgtacctgtgagctataggaatgcttccagccttgat
tccctgcactactttgctgctgagctaaagcccgccaacttgcctgtcacccagccattt
acagtcggtgacaacaagacgtataatggatactggaatcctcctctctcccctctgaaa
agctacagcatctacttccaggctctcagcaaagcaaatggagtaactaacattgggaat
taacttaggacccagagcaaggcaccaatgggcagcgcccaggtgaccccggggactcca
ctctgcctcctcactacaggtgcctccacccagaattctaatactgtagagccagaaaag
caggtggacaacactgtgaaaatggctggtgtgattgccggcctcctcatgtttatcatc
attctcctgggtgtgatgcttaccatcaagaggagaagaaatgcttattcctactcctat
tacttgaagctggccaagaagcagaaagagacccagagcggagcccagagggagatgggg
cctgtggcctcggctgacaaacccaccgccaagctcggcaccagccgcaatgaggaaggc
ttctcttctagctctcaggacgtcaatggattcacagatggcagccgcggggagctctcc
cagccgactctcacgatccagactcacccctaccgcacctgcgaccccgtggagatgagc
tatcccagggaccagttccagcccgccatccgggtggccgacctgctgcagcacatcacc
cagatgaagagaggccagggctacgggttcaaagaggaatatgaggccttacccgagggt
cagacagcttcatgggatacagccaaggaggatgaaaaccgcaataagaatcgatatggg
aacatcatatcctatgaccactcccgggtgaggctgctggtgctggatggagacccacac
tctgactacatcaacgccaactacattgatggatatcatcgacctcgacactacattgct
actcaaggtccaatgcaggagacagtaaaggatttttggagaatgatctggcaggagaac
tccgccagcatcgtcatggtcacaaacctcgtggaagtgggcagggtgaagtgcgtacgg
tactggccggatgacacagaggtctacggagacattaaagtcaccctgattgaaacagag
cccctagcagaatacatcatccgcaccttcacggttcagaagaaaggctaccatgagatc
cgggagctccgcctgttccacttcaccagctggcctgaccacggcgtcccctgctatgcc
actggccttttgggcttcgttcgccaagtcaagttcctcaaccctccagaagctggaccc
atagtggtccactgcagtgctggagctgggaggactggctgcttcatagccatcgacact
atgcttgacatggctgaaaacgaaggagtggtggacatcttcaactgtgtgcgtgagctc
cgggcccagagggtcaaccttgtgcagacagaggagcagtatgtgtttgtgcacgatgcc
atcctggaagcatgcctctgtggcaacactgccatccctgtgtgcgagttccgctccctc
tactacaacatcagcaggctggacccccagaccaactccagccaaatcaaagatgaattt
cagaccctcaacattgtaacaccccgtgtccggcctgaggattgcagcatcggactcctg
ccccggaaccacgataagaatcgcagcatggatgtgctgcctctggaccgctgcctgccc
ttcctcatttcagtggatggagaatccagcaactacatcaacgcggccctgatggatagc
cacaagcagcctgctgccttcgtggtcacccagcaccctctacccaacaccgtggcagac
ttctggaggctggtgttcgactacaactgctcctctgtggtgatgctgaatgagatggac
actgcccagctgtgcatgcagtactggcccgagaagacatctgggtgctacgggcccatc
caggtggagtttgtctcggcagacattgatgaggacatcatccacagaatattccgcatc
tgcaacatggctcggccacaggatggatatcgcatagtccaacacctccagtacattggc
tggcctgcctacagggacacgcctccctccaagcgctctctgctcaaagtggtccgacgg
ctggagaagtggcaggaacagtatgatgggagagaaggacgcaccgtggtccactgccta
aacgggggaggccgcagcggaaccttctgtgccatctgcagtgtgtgtgagatgatccag
cagcagaacatcatcgacgtgttccacattgtgaaaacattgcgtaacaacaaatccaac
atggttgagaccctggaacagtataaatttgtatatgaggtggccctggaatatttaagc
tccttctag
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