Ochotona princeps (American pika): 101516601
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Entry
101516601 CDS
T07609
Symbol
HOXB1
Name
(RefSeq) homeobox protein Hox-B1
KO
K09301
homeobox protein HoxA/B/D1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101516601 (HOXB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101516601 (HOXB1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
101516601 (HOXB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
DUF7645
Motif
Other DBs
NCBI-GeneID:
101516601
NCBI-ProteinID:
XP_004591156
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All DBs
Position
19:complement(11847152..11848406)
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AA seq
302 aa
AA seq
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MDYNRMNSFLEYPLCNRGPNAYSAHSTPTSYPPNSAPTDDSYAGEGRYGGGLSSPALQQS
SGYPAQQPPAALGMPFPSSAPPGYAQAACSHSYAPTQYYTLGQSEGEGGYFHPSSYGAQL
GGLSDGYEVGGTGPGPYPPPQPSYSNEQGTNFAPTFSAADLSEDKEPPCPSESSTPTART
FDWMKVKRNPPKTGKVSELGLGAPAGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAAT
LELNETQVKIWFQNRRMKQKKREREGGRAPPAPTGCPKEAAGDASDQSTCTSPEASPSSV
TS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggactataataggatgaactccttcttagaatatccactctgtaaccggggaccaaac
gcctacagcgcccacagcactccgacatcctatccccccaactcggcacccactgatgac
agctacgcgggcgagggccgctatggcggggggctgtccagtcccgcactccaacagagc
tcgggctatcccgcccagcagccgccggcagcactgggcatgcccttccccagctccgca
cccccggggtacgcccaggccgcctgcagccacagctatgcgcctactcagtactacact
ctgggacaatcggaaggagaaggaggctatttccatccctcgagctacggggctcaacta
gggggtttgtccgacggctatgaagtgggtggaaccggcccggggccatatcccccaccg
cagccctcttacagcaacgaacaggggacgaactttgcacctactttctctgctgctgat
ctctctgaagacaaggaaccgccctgtccgtctgaatctagtactcccacagcccggacc
ttcgactggatgaaggtcaagaggaacccacccaagacaggaaaggtgtcggagctgggc
ctgggcgcgcccgccgggctccgcaccaacttcaccacccggcagctgaccgagctggaa
aaggagttccacttcaacaagtacctgagtcgggcccgcagggtggagatcgccgccacc
ctggagctcaacgaaacgcaggtcaagatttggttccagaaccgccgcatgaagcagaag
aagcgcgagcgcgagggcggccgtgcgcccccagccccaaccggctgccctaaggaggca
gctggagatgcctcggaccagtccacgtgcacctccccggaagcctcgcccagctccgtc
acgtcctga
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