Ochotona princeps (American pika): 101516785
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Entry
101516785 CDS
T07609
Symbol
PTCHD3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101516785 (PTCHD3)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Other domain-containing proteins
Patched domain-containing proteins
101516785 (PTCHD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
AC_N
INTS4_8HBD
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
101516785
NCBI-ProteinID:
XP_004595893
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MEPQAESDPDAGQEAQQEPEVPEAEVRTPEEPPMAETKVGPERQVSEAGLVAEKPASQTK
VEPERLLQVASLASQKSASQMRVDRAKSLPVTSLGKVELEKLMPVASFGSPKRVSQKSDS
QPKVEPERLLPEDSGAPQKPASQTRVEPERFLPVDSGAPQKPASQTRVEPEKLLQVDSVA
PQKPASQTRVEPERLLPVASFGSPKPASQTRVERAKPASRRRLEPEPAGQSQSENGREST
SKRLSKAKSPSVVPTEAKADAAFLRSPEQPSQRRASSRSQTAQSQQLRDRWESAAGDLLP
LAVIRRRKCNTNCIEAPMVRVFGRLGWAVGSHPWFFLLLPMVLTGLLGIGLVYLPWGGLE
NLEEQYTPIGSPAKAERRFVQGHFTTNDSYRFSDSRRSTETNFLSIIVVSNGNSVLHRDI
FTEVSRLDHAVQTMALTQDNGVQIQYRKVCAKHKTFCVPCNPLLYAWQRNPQLNLSQVTF
PIFNHNNHPVYLAGFFGKTTLGESLGVSQLLVEAKAMRLLYYLKTERSEDNELSKKWLTH
FLSQFNNMKHRLALRHVQLVHFTSLSRQMEFEATSETVIPLFYWAYALLIIFAIISCYRL
DCVRNKMWVAVFGVICVVLSVVSSFGLMLFVGVPFVIIVANSPFLILGVGVDDMFIMISA
WQKTKLLKNTRERMADVYCRVAVSITITTLTNILAFYTGVMSSFRSVQYFCIYTGTSLLF
CYLYSITCFGAFMALDGRRERKCFHWLKKPDPRYFSLKKFCCLPCGAVIDEEGTDIHPMN
VFFRDYFGPFLTNIWSKLLVVLLYLGYLTSSIYGCFRVQEGLDVRNLASDDSYIIPYFNT
EEDYFSDFGPRVMVVVTEPVEYWNERVRQKLEKCITDFENNVYINKNLTEFWLSTYVKHL
KQTGLDPNDKQVFMNNLTAFLASVSFFMYDLNISSSNEIISSRGFIQSVDISTSSSKKTM
LLQLRDIAEKCEVPLLVYNYAFIYFDQYAAIIENTIRNVMVASSVMLIVALLLIPHPVCS
LWVTFAIASVIVGVVGFMSFWNVNLDSISMINLVICIGFSFDFSAHISYAFVSSAEPSVN
RRSIEALYLLGYPILQSAISTIIGVCVLFAAKAYIFRTFAKIMFLVMLFGATHGLIFIPV
FLTFFGKVL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaggcggagtcggatcctgatgcggggcaggaggcccagcaggagccggag
gttccagaggcagaagtgaggacgcccgaggagccgccgatggccgagaccaaggtgggc
cccgagagacaggtgtccgaggctggactggttgctgagaagccggcatcgcagacgaag
gtggagcccgagagactcctgcaggttgccagccttgcatcccagaagtccgcgtcccag
atgagggtggatcgtgcgaaatctctgccagttaccagcctcggtaaggtggagttggag
aaactcatgccggttgccagctttgggtctccaaagcgggtatcgcagaagtcggattca
cagccgaaggtggagcccgagagactcctgcctgaggacagcggtgcgccgcagaagccg
gcatcacagacgagggtggagcccgagagattcctgcctgttgacagcggtgcgccccag
aagccggcatcacagaccagggtagagcccgaaaaactcctccaagttgacagcgttgcg
ccccagaagccggcatcccagacgagggtagagccggagagacttttaccggttgccagt
tttgggtccccgaagccggcatcacagacgagggtggaacgtgccaagccggcatcacgg
aggagactggagcctgaacccgccggacagtcgcagtctgagaacgggagggaatcaacc
tccaagaggttgtccaaggccaagagcccctcggtggtgcccacggaggccaaggcagat
gctgcgttcctcaggtccccggagcagccctcccagcggagggcctcatccaggtcgcag
acggcgcagtcccagcagctgcgggacaggtgggaatcggcggcaggggacctgttgcct
ctagctgtcatccggaggcgcaaatgcaacactaactgtatagaagcaccgatggtccgg
gtctttgggagactgggctgggccgtaggctctcatccctggttcttcctgctgctgccc
atggtgctgacggggctgctgggcattggcctggtctacctaccctgggggggcctggaa
aacttggaggagcagtatacaccgattgggagccccgccaaagcagagcggcgtttcgtt
cagggacatttcaccaccaacgactcctatcggttctccgattcccgcaggagcactgag
accaatttcctgtccatcatcgtagtgtccaatggcaattctgtgctgcatagagacatc
tttaccgaggtcagcagattggaccatgcggtgcaaaccatggctttgacgcaggacaac
ggagtgcagattcagtaccggaaagtgtgtgccaagcacaagacattctgtgtcccctgc
aacccgctgctgtacgcctggcagcggaacccccagctcaacctgagccaggtgactttc
cccatcttcaaccacaacaaccatcccgtctacctggctggcttctttggcaaaaccact
ctgggagagagtttgggagtgagccagttgctggtggaggccaaagccatgcggctactg
tactacctcaagacggagcgcagcgaggacaatgagctcagcaaaaagtggctcacgcac
ttcctgagccagttcaataacatgaagcacaggctggccctgcggcacgtgcagcttgta
cacttcacgtcgctctccaggcagatggagtttgaggccacttccgagacggtgatccct
ctattttactgggcctacgctctgctcatcatctttgccatcatctcgtgctacaggctg
gactgtgtacgcaacaagatgtgggtggccgtctttggggtgatctgtgtggtcttgtcg
gtggtgagcagtttcgggttgatgctcttcgttggggtaccgtttgtgatcatagttgcc
aactcgccctttcttattctaggtgtgggggtggatgacatgttcatcatgatctctgcc
tggcagaagaccaaactgctgaagaacacgagggaacgcatggcggatgtgtattgcagg
gtggcggtatccatcaccatcactaccctgaccaacatcctggccttctacacgggggtc
atgagctctttcaggtcggtgcagtatttctgcatctacacggggacaagcctgctcttc
tgctacctgtacagcatcacctgctttggcgcattcatggccctagatggcagaagagag
aggaagtgcttccactggttgaagaagccggaccccaggtatttctcacttaaaaagttc
tgctgtctcccctgcggcgctgtcatcgatgaagaagggaccgacatccatcccatgaat
gtgttcttcagggactatttcggtcccttcctgacaaacatctggtccaaactgctcgtg
gtgctgctgtaccttgggtacctcaccagcagcatatacggctgtttccgtgtgcaggaa
gggttagacgtcaggaacctggccagtgacgattcgtacatcattccgtatttcaacaca
gaggaggattacttctccgatttcggtcccagggtcatggtggtggttaccgaacccgtt
gagtactggaacgaacgtgttaggcagaaactggaaaaatgcatcacggattttgaaaac
aacgtctatatcaataaaaacctgacagaattctggttatcgacgtacgtgaagcatttg
aagcaaacagggctggaccccaatgataagcaggttttcatgaacaacctcactgccttt
ttagctagtgtgtccttttttatgtatgatctgaacatctcatcttccaatgaaatcatt
tcttcccggggctttattcagtccgttgatatctccacttccagcagtaagaagacgatg
ctgctgcagttacgagacatcgccgagaagtgcgaagtccccctcttggtgtacaactat
gcctttatatattttgatcagtacgccgcaatcatagagaacacaattcggaacgtcatg
gtggcgtcgtcggtgatgctcatcgtggccttgttgctcattcctcacccggtgtgctcc
ttgtgggtgacgtttgcgattgcttctgtgattgtgggggtggtggggttcatgtccttc
tggaacgtgaaccttgactccatctccatgatcaacttggtcatctgcataggattttct
ttcgatttttccgcacacatatcctatgcctttgtatccagtgccgagccctcggtcaac
agaagatccatcgaggcattgtacctgctaggctaccccatcctgcagagtgccatctca
acaatcataggtgtgtgtgtgttgttcgcagctaaagcgtacattttcaggacatttgcg
aaaattatgttccttgttatgttgttcggggccacccatggcctcatttttattccggtg
ttcttaacattctttggaaaagttctatga
DBGET
integrated database retrieval system
