Ochotona princeps (American pika): 101516808
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Entry
101516808 CDS
T07609
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101516808 (RPRD1A)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101516808 (RPRD1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
101516808
NCBI-ProteinID:
XP_004579603
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Position
9:31123872..31180124
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AA seq
312 aa
AA seq
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MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYEND
VLEQLKQALYGEKKPRKRTYEQIKVDENENCSSIGSPSEPPQTLDLVRALQDLENAASGD
AAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQL
TRMLADFLRCQKEALAEKEQKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHM
HLPFAGDLYTED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccttctctgaggcggcgctggagaagaagctgtcggagttgagcaactcgcag
cagagcgtgcagaccctgtccctgtggcttatccaccaccgtaagcactcgcggcccatc
gtcaccgtgtgggagcgggagctacgcaaagccaagccaaacaggaagcttacttttctc
tacttagccaatgatgtcattcagaacagcaaacggaaggggccggagtttaccaaagat
tttgcaccagttatagtggaggcttttaagcatgtttcaagtgaaactgatgaaagttgt
aagaaacaccttggaagagtgctgtctatatgggaggaaaggtctgtttatgaaaatgat
gtattagagcagcttaagcaagctttgtatggtgagaagaagcctaggaagcgaacttat
gaacagataaaggtggatgaaaatgaaaactgttcatctattggttcaccaagtgagcca
ccccagactctagatctcgttagagcattgcaagatctagaaaatgccgcttcgggcgat
gcggcagttcatcagaggatcgcttctttgcccgtggaagtgcaagaagtatccctacta
gataaaataacagataaagaatctggagaaaggctttctaaaatggtagaggatgcttgt
atgttgctggcagattacaatggcagattggcggcagaaatagatgataggaagcaactc
actcgaatgttagctgattttcttcggtgtcaaaaggaagcccttgcagagaaagagcaa
aaattggaagaatacaaacgcaagttagccagagtttccctggtgcgcaaagaactcagg
tcccggatccagagcctgccagacttgtctcgattgcccaatgtcactggcagccacatg
caccttccctttgcgggagacctctacactgaagattga
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