Ochotona princeps (American pika): 101516854
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Entry
101516854 CDS
T07609
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101516854 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101516854 (NHLRC1)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101516854 (NHLRC1)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101516854 (NHLRC1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
Baculo_IE-1
Prok-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101516854
NCBI-ProteinID:
XP_004593155
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All DBs
Position
12:complement(18784755..18785939)
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AA seq
394 aa
AA seq
DB search
MGAEASEGRPALRELVREAEISLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPSSAAPRAAAAAACAPGALTCL
HSFGGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKVFDSGGGCAHQFGEKGDAAQDVRYA
LDVAVTNDCHVVITDAGDRSVKVFDFFGQVKLVVGGGRFSLPWGVEITPQNGVVVTDAEA
GALHLLKVDFAEGVLRGTQKLQAALCSPRGVAVSWLTGAIAVLEHPAGGRTRVKVFGSRM
QLLGQVDTFGLSLFFPSQVTASAVTFDHQGNVIVAETSGAAILCLGKPEEFPVVKPMVTQ
GLCRPVALAFTKENSLLVLDAASHSVKVYKVDWG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcctcggagggccggccggcgctgcgggagctggtgcgcgaggccgag
atcagcctgctcgaatgcaaggtgtgcttcgagaggttcggtcaccgtcagcagcggcgg
ccgcgcaacctgccctgcggccatgtggtctgcctggcctgcgtggccgccctggcgcac
ccgaggacgctggctctcgagtgtcccttctgccggcgagcctgccgcggctgcgacacc
agcgactgcctgccagtgctgcacctgctggagctgctgggctccgcgctgcgcccgtcg
tccgccgccccgcgcgccgccgccgccgcagcctgcgcgcccggggccctcacctgcctg
cactccttcggcggctggggcacgctggtcaaccccacggggctggcgctgtgccccaag
acggggcgggtggtggtggtgcatgacggcaagaggcgggtcaaggtctttgacagcggg
ggagggtgcgcccaccagtttggggagaagggcgacgctgcacaagacgtcaggtatgcc
ctggatgtcgccgtcaccaacgactgccacgtggttatcaccgacgccggcgaccgctcc
gtcaaggtgttcgactttttcggccaggtcaagctcgtggtcggaggcggccgcttctca
ttgccctggggggtggagatcacccctcagaacggggtggttgtgaccgatgccgaggca
ggggcgctgcacctcctgaaggtggacttcgccgaaggcgtcctccggggcacgcagaag
ctgcaggcggctctctgcagcccccgcggggtggccgtgtcctggctcaccggggccatc
gcggtgctggagcatcctgctggcggcaggaccagggtgaaagtgttcggctccaggatg
cagctcctcggccaggtggacaccttcgggttgagcctcttcttcccctcgcaagtaacg
gcttcggccgtcaccttcgatcaccaggggaatgtgatcgtggctgagacctctggggcc
gccatcctatgcctgggaaagcctgaggagttcccggtggtgaaacccatggtcactcag
gggctttgccgtcctgtggccctggccttcaccaaagagaattctcttcttgtgctggac
gcagcatcccattctgtgaaggtctacaaggttgactgggggtga
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