Ochotona princeps (American pika): 101516975
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Entry
101516975 CDS
T07609
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin isoform X2
KO
K24064
beta-syntrophin
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
opi05410
Hypertrophic cardiomyopathy
opi05412
Arrhythmogenic right ventricular cardiomyopathy
opi05414
Dilated cardiomyopathy
opi05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101516975 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101516975 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
101516975 (SNTB1)
05414 Dilated cardiomyopathy
101516975 (SNTB1)
05416 Viral myocarditis
101516975 (SNTB1)
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Gene cluster
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
101516975
NCBI-ProteinID:
XP_004580761
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Position
3:complement(66284474..66529061)
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AA seq
541 aa
AA seq
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MAVAAAAAAAAAGPAGGGAGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYN
GIGTTTNNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLK
QELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAV
QALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGSSSDPLSSQPFSF
HRDRKSIPLKMCYVTRSMALADPENRQLEIHSPDAKHTVILRSKDSATALAWFSAIHSNV
SDLLSRVMVEVKEQLGKTGIAGGREIRHLGWLAEKVPGESEKPWKAALVVLTEKDLLIYE
HMPRRKEAWLSPVHSYPLLATRLVHSGPGKGSPQVGVDLSFATRTGTRQGIETHLFRAET
SRDLSHWTRSIVQGCHNSAELTTEISTACTYKNQECRLTVHYENGFSITTEPQEGAFAKT
IIQSPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLV
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgcggcggcggcagcggcagcggctgggccggccggtgggggagccggc
cgggctcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctg
gtgaacttgagcgaagacgccctggttctgagctgcgaggagggcgctgcggcgtacaac
ggcatcggaactaccaccaataatggttcgttctgcaggggcgccggggccgggcaccca
ggagcgggcggcgcgcaacccccggactcgcccgccggagtccgcacagcctttaccgac
ctgcccgagcaggtgcccgagtctatctcgaaccagaagcgcggggtaaaagtgctgaag
caggaactgggtggcctgggcatcagcatcaaggggggcaaggagaacaagatgccgatc
cttatcagcaagatcttcaaggggctggcggcagaccagacccaagccctgtacgtggga
gacgccatcctgtccgtaaacggagccgacttgcgggacgccacccacgacgaggcggtg
caggctctgaagcgcgctggcaaagaagtactgctggaagtgaagtacatgcgggaagcc
actccctacgtgaagaaaggatcgcctgtttcagagataggatgggaaacaccaccaccg
gaatcccctcggttagggggcagctcctcagaccctctgtcgtcacagcccttctccttc
catagagaccggaaaagcatccccctcaaaatgtgctatgtcacacggagtatggccttg
gctgaccctgagaacaggcagcttgaaatccactctccagatgctaagcatacagtgatc
ctaaggagtaaggactcagctactgccctggcttggttcagtgctatccattccaacgtt
agtgacctgctgagccgagtgatggtggaggtgaaggagcaactggggaaaaccggcatt
gccgggggccgagaaatcagacatcttggctggcttgcagaaaaggtgccaggtgagagt
gagaaaccgtggaaagcagccctggttgtgctgactgaaaaggaccttctcatctatgag
cacatgccacggaggaaggaagcctggctcagccctgttcactcatacccacttcttgcc
accaggctggttcattcaggtccagggaagggatcaccccaggttggtgtggatctatct
tttgcgacgcgcactggtaccaggcaagggattgaaacacatctcttccgggcagagacc
agcagggacctctcccattggacaagaagcatagtacagggttgccacaactcggccgaa
ctcactactgaaatcagcacagcttgcacctataaaaaccaggagtgccgcttgaccgta
cattatgagaatggattttctattaccactgaacctcaggaaggtgcctttgccaagaca
atcatacagtctccgtatgaaaaactgaaaatgtcctcagatgatggaatcaggatgctc
tatttagattttggtggcaaagaaggagagattcaactggaccttcactcctgtcccaag
ccgattgttttcatcattcattccttcctgtcagctaagatcacaagactgggcttggtg
gcctga
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