Ochotona princeps (American pika): 101516979
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Entry
101516979 CDS
T07609
Symbol
SEMA3B
Name
(RefSeq) semaphorin-3B
KO
K06840
semaphorin 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101516979 (SEMA3B)
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
V-set
Ig_6
I-set
Motif
Other DBs
NCBI-GeneID:
101516979
NCBI-ProteinID:
XP_012781341
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Position
9A:18337610..18362169
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AA seq
785 aa
AA seq
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MAAPISQGRVQGNSRLLHTHPLNPERPELTGLRRAEAAAMILGLALLWAVGLGGAAPSPP
RLRLSFQELQTWHGLRTFHLERTCCYEALLLDEERGRLFVGAENHVASLNLDNISKRAKK
LAWPAPVEWREECNWAGKDIGTECMNFVKLLHTYNRTHLLACGTGAFHPTCAFVEVGHRP
EEPVLRLDLRRLEDGKGKSPYDPRHRAASVLVGEELYSGVAADLMGRDFTIFRSLGQRPS
LRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRELAVEAAPALGRLSVSRVGQIC
RNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDHLQDVFLLTSRDRRTPLLYAVFST
SSGVFQGSAVCAYSMDDVRRAFLGPFAHKEGPTHQWVSYQGRVPYPRPGMCPSKTFGTFG
STKDFPDDVIQFARNHPLMYNSVLPIGGRPLFLQVGAGYTFTQIVADRVAAADGHYDVLF
VGTDAGTVLKVIIVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVA
QIALHRCAAHGRACAECCLARDPYCAWDGAACTRFQPSAKRRFRRQDIRNGDPSVLCSGD
LSSSSRPTLLERKVFGVEGGSAFLECEPRSLQARTEWTFQRAGQVAHTQVQPEERVLVTA
QGLLLRALRRGDSGVYMCVAVEQGFSQPLRRVALHVLSAAQAERLARAEEGPPAAALPGP
KLWYRDFLQLVEPGGGGGANSLRMCRPQPQAQETPSRSPRREGPNKRTHASEPRAERGPR
SAAHW
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccatatcccagggcagagtccagggcaactcaaggcttctccacacacac
ccgctgaaccctgagcgccctgagctgacggggctgaggcgggctgaggccgccgccatg
atcctggggctggccctactctgggcagtggggctgggaggggctgcccccagcccccca
cgtcttcgactctccttccaagagctgcaaacctggcatggcctccggaccttccatctg
gagcggacctgctgctacgaagccttgctgctggatgaagaacgcgggcgcctgttcgtg
ggtgctgagaaccatgtggcctcgctcaacctggacaacattagcaagagggccaagaag
ctggcctggccagcccctgttgaatggcgagaagagtgcaactgggctgggaaggacatt
ggcacggagtgcatgaacttcgtgaagttgctgcatacctacaaccgcacccacctattg
gcctgtggtacaggagctttccaccccacctgtgcttttgtggaggtgggccaccggcct
gaggagcctgtgctgcggctggacctgcgcagacttgaggatggcaaggggaagagccct
tatgaccccaggcaccgggctgcctccgtgctggtgggggaggagctgtactcgggtgtg
gcagcagacctcatgggccgggacttcaccatctttcgaagcctgggccagcgtccgagt
ctccgaacagagccgcacgactcccgctggctcaatgagcccaaatttgtgaaggtcttt
tggatcccggagagtgagaacccagatgacgacaaaatctacttcttcttccgtgagttg
gcagtggaggcggcaccagccctgggacgcctgtccgtgtcccgtgttggccagatctgc
aggaatgacgtgggcggccagcgcagcctggtcaacaagtggacgacgttcctgaaggcg
cgactcgtgtgctcggtgcctggcgtcgagggtgacacccacttcgaccacctgcaggac
gtgttcctgctgacctcgcgcgaccgccggaccccgctgctctacgcagtcttctccaca
tccagtggtgtcttccagggctcagcagtgtgtgcctacagcatggacgacgtgcgccgg
gccttcctggggccctttgcacacaaggaggggcccactcaccagtgggtgtcctaccag
ggtcgcgttccctaccctcgaccaggcatgtgccccagcaagacctttggcacctttggg
tccaccaaggacttccctgatgatgtcatccagtttgcccggaaccaccccctcatgtat
aactcggtgctgcccatcgggggacgccctcttttcctgcaagtgggcgcaggatacacc
ttcacccaaattgtggctgaccgcgtggcagcggcggatggccactacgacgtcctcttc
gtgggtacagacgcaggcacggtgctgaaggtgatcatcgtgcccaagggcagccggccc
agcgccgaggggctgcttctggaggagctgcatgtgtttgaggactcggccgctgtcacc
agcatgcaaatctcctccaaaaggcaccagctgtacgtggcctcgcggagcgcggtggcc
cagatagctctgcaccgctgcgctgcccacggccgcgcctgcgccgaatgctgtctggcg
cgggacccttactgcgcctgggacggggctgcgtgcacgcgcttccagcccagtgccaag
aggcggttcaggagacaagatataaggaatggagaccccagtgtgctgtgctcaggggac
ttgtcatcgtcgtcacggcccacgctgctggagcggaaggtgttcggcgtggaaggtggc
agcgcctttctggagtgtgagccccgctcgctgcaggcacgcacggagtggacgttccag
cgcgccggtcaggtggcccacacccaggtgcagccggaggaacgcgtcctcgtaaccgcg
caggggctgctgctgcgcgcgctgcggcgcggggactcgggcgtctacatgtgcgtcgcc
gtcgagcagggcttttcgcagccactgcggcgagtggcgctgcacgtgctgagcgctgcg
caggccgaacgcctggcgcgggccgaggaagggccaccggccgcggcgctgcccggcccc
aaactctggtaccgggacttcctgcagctggtggagccgggcggcgggggcggcgctaac
tccctgcgcatgtgccggccgcagccccaagcccaggaaaccccctccaggtctcccaga
cgggagggacccaacaagcggacgcacgcctccgagccgcgcgccgagcgcgggccgcgc
agcgcggcgcactggtga
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