Ochotona princeps (American pika): 101517006
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Entry
101517006 CDS
T07609
Symbol
KHDC4
Name
(RefSeq) KH homology domain-containing protein 4
KO
K25780
kelch domain-containing protein 4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101517006 (KHDC4)
Spliceosome [BR:
opi03041
]
Complex B
Other components
Prp19-related factors
101517006 (KHDC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
RxLR_effector
Motif
Other DBs
NCBI-GeneID:
101517006
NCBI-ProteinID:
XP_004589076
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Position
13:complement(115345085..115369362)
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AA seq
612 aa
AA seq
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MSAGSATHPGAGGRRSKWDQPAPAPLLFLPPATPGAEVPTSAGSPGGATAAPSGALDAAA
AVAAKINAMLMAKGKLKPTANATDKLQAPGKGLTSNKSKDDLVVAEVEINDVPLTCRNLL
TRGQTQDEISRLSGAAVSTRGRFMTSEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKE
IITNGVVKAATGTSPTFNGATVTVYHQPAPIAQLSPAVNQKPPFQSGMHYVQDKLFVGLE
HAVPTFNVKEKVEGPGCSYLQHIQIETGAKVFLRGKGSGCIEPASGREAFEPMYIYISHP
KPEGLAAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGY
QSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAST
GQSPMSGPFIPAAPVKTALPAGPQPQPQPPLTSQPQAQKRRFTEELPDEQESGLLGYQHG
PIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSG
TLAGSHDYPAKKMKTTEKGFGLVAYAADSSDEEEEHGGHKNASSFPQGWSLGYQYPTSQP
RAKQQMPFWMAP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggggagcgcgacgcatcctggagccggcgggcgccgcagcaaatgggaccag
cccgcgcccgccccgctgctcttcctcccgcccgccacccccggggccgaggtacccacc
agtgccggcagccccgggggcgccacggccgccccctcgggagccctggatgctgccgct
gccgtggctgccaagatcaatgccatgctcatggccaaagggaagttgaagccaactgcc
aacgctaccgataagcttcaggctcctggcaaaggcctcactagcaataaaagcaaagat
gacctggtcgtggctgaagttgaaattaatgatgtgcctctcacatgtagaaatttgctg
actcgaggacagactcaagatgagatcagccgccttagtggggctgcagtgtcaacgcga
gggaggttcatgacaagtgaagagaaggcaaaagtgggaccaggggatcgtccattgtat
cttcatgttcagggacagacacgggagttagtggacagagctgttaaccggatcaaagaa
attatcaccaatggagtggtaaaagccgccacagggacaagccctactttcaatggcgcg
acagtcaccgtctatcaccagccagcacccattgctcagctgtctccagccgtcaaccag
aaacctcccttccagtcagggatgcattatgttcaagataaattattcgttggtctagaa
catgctgtgcctacttttaatgtcaaagagaaggtggaaggtccaggctgctcctacttg
cagcatattcagattgaaacaggcgccaaggtcttcctccggggcaaaggctcgggctgc
atcgagccagcatctggtcgggaagcatttgagcccatgtatatttacatcagtcatccc
aaaccagaaggcctggctgctgccaagaagctctgtgagaatctcctgcagacagttcat
gctgaatactctagatttgtgaatcagattaatactgcagtacctttaccaggctataca
caaccctctgccataagtagtgtccctcctcagccaccatattatccatccaatggctat
cagtctggttaccctgttgttccccctcctcagcagccagtccaacctccctacggagta
ccaagcatagtgccaccagctgtttcactggcacctggagtcttgccagcattacctact
ggagtcccacctgtgccaacacaatatccgataacacaagtgcagcctccagctagcact
ggacagagtccaatgagtggtcctttcattcctgctgctcccgtcaaaacggccttgcct
gctgggccccagccccaaccccagcccccactcacatctcagccccaggctcagaagagg
cgattcacagaggagctaccagatgaacaggaatctggacttcttggataccagcatgga
cccattcatatgactaatttaggtacaggcttctccagtcagaatgagattgaaggtgca
ggatcgaagccggcaagttcctcaggcaaagagagagagagggacaggcagttgatgcct
ccaccagcctttccagtaactggaataaaaacagagtctgatgaaaggaatggatctggg
accttagcggggagccatgattacccagccaagaagatgaaaactacagagaagggattt
ggcttggtggcttatgctgcagattcatctgatgaagaggaggaacatggaggccataaa
aatgcaagtagttttccacagggctggagtttgggatatcagtatcctacgtcacagccg
cgagctaaacaacagatgccattctggatggccccgtag
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