Ochotona princeps (American pika): 101517031
Help
Entry
101517031 CDS
T07609
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04150
mTOR signaling pathway
opi04310
Wnt signaling pathway
opi04928
Parathyroid hormone synthesis, secretion and action
opi05010
Alzheimer disease
opi05022
Pathways of neurodegeneration - multiple diseases
opi05200
Pathways in cancer
opi05224
Breast cancer
opi05225
Hepatocellular carcinoma
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101517031 (LRP5)
04150 mTOR signaling pathway
101517031 (LRP5)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
101517031 (LRP5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101517031 (LRP5)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101517031 (LRP5)
05226 Gastric cancer
101517031 (LRP5)
05224 Breast cancer
101517031 (LRP5)
09164 Neurodegenerative disease
05010 Alzheimer disease
101517031 (LRP5)
05022 Pathways of neurodegeneration - multiple diseases
101517031 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101517031 (LRP5)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101517031 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
Insulin_TMD
cEGF
Motif
Other DBs
NCBI-GeneID:
101517031
NCBI-ProteinID:
XP_004598316
LinkDB
All DBs
Position
1:complement(112463531..112520271)
Genome browser
AA seq
1598 aa
AA seq
DB search
MVSCACVLRGPAPAAASPLLLFANRRDVRLVDAGGVKLESTIVVSGLEDAAAVDFQFSKG
AVYWTDVSEEAIKQTYLNQTGVAVQSVVISGLVAPDGLACDWVGKKLYWTDSETNRIEVA
NLNGSSRRVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDGSTRKVIVDSDIY
WPNGLTIDLDEQKLYWADAKLSFIHRANLDGSLRQKVVEGSLTHPFALTLSGDTLYWTDW
QTRSIHACNKRTGGKRKEILSSLYSPMDIQVLSQERQPSLHTRCEEDNGGCSHLCLLSPR
EPFYACACPTGVQLQDNGRTCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHA
IAIDYDPLEGYVYWTDDEVHAIRRAYLDGSGAQTLVSTEINDPDGIAVDWVARNLYWTDT
GTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGENPKIECANLDGQERH
VLVNTSLGWPNGLALDPQEGKLYWGDAKTDRIEVIGVDGTKRRTLLEDKLPHIFGFTLLG
DFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCADRNGGCSHL
CFFTPRATKCGCPIGLELLSDLQTCIVPEAFLLFTSRAAIHRISLETHTNDVAIPLTGVK
EASALDFDVCSHRIYWTDVSLKTISRAFMNGSSVEQVIDFGLDYPEGMAVDWMGRNLYWA
DTGTNRIEVARLDGQFRRVLVWRDLDNPRSLALDPAKGYLYWTEWGGRPRIVRAFMDGTN
CVTLVDKVGRANDLTIDYADQRLYWADLDTNMIESSDMLGQERAVIADDLPHPFGLTQYS
DYIYWTDWNLHSIERADKTSGRNRTLVQGHLDFVMDILVFHASRQGGLNDCTYSNGQCGQ
LCLAVPAGHRCSCASHYTLDPDTRNCSPPTTFLLFSQKYAISRMIPDDQRSPDLVLPLHG
LRNVRAISYDPLDRFIYWVDGRQNIKRAKDDGTQPFVLTSQSQNPDRQPHDLSVDIYGRA
LFWTCEATNTINVQRLNGEAMGVVLRGDRDRPRAIVVNAERGYLYFTNMQERTAKIERAA
LDGTEREVLFTTGLVRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRLTLEDANIVQP
AGLTVLGQHLYWVDRQQQMIERVEKTTGAKRTRVQGRVAHLTGIHAVEEVSPEEFLAHPC
ARDNGGCSHICVAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACATGEIDCIPGA
WRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDGEADCQDRSDEADCDAVCL
PNQFRCASGQCVLIRQQCDSFPDCMDGSDELMCEITRPPSDDVVAHSSAIGPVIGIILSL
FVMGGVYFVCQRVVCQRYAGASGPFPHEYVSGTPHVPLNFIAPGGSQHGPFAGISCSKSM
MNSMNLVGSRAGVPLYDRNHVTGASSSSSSSTKATLYPPILNPPPSPATDPSLYNMDVFC
SANIPPAATPYRPYVIRGTVPPTTPCSTDVCDSDYSASRWKSSKYYLDLNSDSDPYPPPP
TPHSQYLSAEDSCPPSPATERSYFHLFPPPPSPCTDSS
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctgcgcctgtgtcctcagaggccccgccccagctgctgcctcgccgctcctg
ctgtttgccaaccgccgggatgtgcgactggtagacgctggcggcgtcaagctggagtcc
accatcgtggtgagcggcctggaggatgcggcggccgtggacttccagttctccaagggc
gccgtgtactggacagacgtgagcgaggaggccattaagcagacctacctgaaccagacg
ggggtggccgtgcagagcgtggtcatctccggcctggtggcgcccgacggcctggcctgt
gactgggtgggcaagaagctctactggaccgactcggagaccaatcgcatcgaggtggcc
aacctgaacggctcatcgcgccgggtgctgttctggcaggacctggaccagccgcgggcc
attgccttggaccctgctcacgggtacatgtactggacggactggggggagacgccgcgg
atcgagcgggcaggcatggacggcagcacgcgcaaggtcatcgtggactcggacatttac
tggcccaacgggctgaccatcgacttggatgagcagaagctgtactgggcagatgccaag
ctcagcttcatccaccgtgccaacctggacggctccctccggcagaaggtggtggagggc
agcctgacgcaccccttcgccctgacactgtctggggacaccctctactggacggactgg
cagacccgctccatccacgcgtgcaacaagaggaccggggggaagaggaaggagattctt
agctccttgtactcgcccatggacatccaggtgctcagccaggagcggcagccttccctc
cacacccgatgtgaggaggacaatggtggctgctcgcacctgtgcctgctgtccccgagg
gagccattctacgcctgtgcctgcccgactggggtgcagctgcaggacaatgggcgcacg
tgtaaggcaggggcggaggaggtgctgctgctggcgcggcgcacagacctgcggaggatc
tcgctggacacgccggacttcacggacatcgtgctgcaggtggatgacatccggcatgcc
attgccattgactacgacccgctggagggttacgtgtactggactgacgacgaggtgcac
gccatccgccgggcctacctggacggctcgggagcccagacgctggtcagcactgagatc
aacgaccccgatggcatcgccgtcgactgggtggcccgtaacctctactggactgacacg
gggaccgaccgcatcgaggtcacgcgcctcaatggtacctctcgcaagatcctggtgtct
gaggacttggacgagccccgcgccattgtgctgcaccctgtgatgggcctcatgtactgg
acagactggggggaaaaccccaaaatcgagtgtgccaacctggacgggcaggagcggcat
gtgctggtcaacacctccctcggctggcccaatggcctggccttggacccgcaggagggc
aagctgtactggggtgatgccaagacggacaggattgaggtgatcggcgtggacgggacc
aagaggcggaccctcctggaggacaagctcccgcacattttcgggttcacgttgctgggc
gacttcatctactggacggactggcagcggcgcagcatcgagagggtgcacaaagtcaag
gccagccgtgatgtcatcatcgaccagctgcctgatctgatggggctcaaggccgtgaat
gtggccaaagtcgtcgggaccaacccgtgcgcggacaggaatggcggctgtagccacctg
tgcttcttcacgcctcgtgccaccaagtgcggctgccccatcggcctggagctgctgagc
gacctgcagacctgcatcgtgcctgaggccttcctgctgttcaccagccgagctgccatc
cacaggatctccctggagactcacaccaacgacgtggccatcccgctcacgggcgtcaag
gaggcctcggcgttggacttcgacgtgtgcagccaccgcatctattggacagacgtcagc
ctgaagaccatcagccgtgccttcatgaacggcagctcggtggaacaggtgattgacttc
ggcctcgactaccccgaaggcatggctgtcgactggatgggcaggaacctttactgggcc
gacaccgggaccaacaggattgaagtggcccggctcgatggccagttccggcgggtgctg
gtgtggagggacttggataaccccagatcgctggccctggatcctgccaagggctacctc
tactggaccgaatggggcggcaggccgaggattgtgcgggccttcatggatggcactaac
tgtgtgacgctggtggacaaggtgggccgggccaacgacctcaccatcgactacgctgac
cagcgcctgtactgggccgacctggacaccaacatgatcgagtcgtccgacatgctgggt
caggagcgggcggtgattgctgacgacctcccacaccccttcggcctgacgcagtacagc
gactacatctactggaccgactggaacctgcacagcattgagcgtgccgacaagaccagt
ggccgcaaccgcaccctcgtccagggccatctggacttcgtcatggacatcctggtgttc
cacgcctcccgccagggtggcctcaatgactgcacgtacagcaacggccagtgcgggcag
ctgtgcctcgccgtccctgctggccaccgctgcagctgcgcctcccattacaccctggac
cccgacacccgcaactgtagcccacccaccaccttcctgctgttcagccagaaatatgcc
atcagccgtatgatcccagacgaccagcgcagcccagaccttgtcctgccactgcatggg
ctcaggaacgtccgggccattagctacgacccactggacaggttcatctactgggtggat
gggcgccagaacatcaagcgtgcgaaagatgacgggacccagcccttcgtgttaacttcc
cagagccagaacccggacaggcagccgcacgacctgagcgtggacatctacggccgcgca
ctcttctggacgtgcgaggccaccaacaccatcaacgtgcagcggctgaacggcgaggcc
atgggggtggtgctccgaggggaccgtgacaggcccagggccatcgtggtcaacgctgag
cgagggtatctgtacttcaccaacatgcaggagcgcacggccaagatcgagcgggcggcc
ctggacggcaccgagcgcgaggtcctcttcaccacgggcctcgttcgccctgtggccctc
gtggtggacaacacgctgggcaagctcttctgggtggacgctgacctgaagcgcattgag
agctgcgacctgtcaggagccaatcgcctgaccctggaagacgccaacattgtgcagcct
gcgggcctgaccgtgctgggccagcacctctactgggtcgaccgccagcagcagatgata
gaacgcgtggagaagaccacgggggccaagcggacgcgcgtccagggccgcgtagcccac
ctcacgggcatccacgctgtggaggaagtcagtccggaggagttcttggcccatccatgt
gcccgggacaatggcggctgctcgcatatctgcgttgccaagggtgacgggacgccgcgg
tgctcctgccctgtccacctagtgctcctgcagaacctgctcacctgcggagaaccaccc
acctgctcccccgaccagttcgcctgtgccacgggggagatcgactgcatcccaggtgcc
tggcgctgtgacggctttcccgagtgcgacgaccagagtgacgaggagggctgccctgtg
tgctcggccgcccagttcccctgtgcacggggccagtgcgtggacctgcggctgcgctgt
gacggcgaagccgactgccaggaccgctccgacgaggctgactgcgacgctgtctgtctg
cccaaccagtttcgctgtgccagcggccagtgtgtgctcatccgacagcagtgcgactcc
ttccctgactgcatggatggctctgatgagctcatgtgtgaaatcaccaggccaccatcg
gacgatgtggtggcccacagcagtgccatcgggcctgtcattggcatcatcctttccctg
tttgtcatgggcggggtttacttcgtgtgccagcgtgtggtgtgccagcgctatgccggt
gccagtgggcccttccctcacgagtatgtcagcgggaccccgcacgtgcccctcaatttc
atcgcccctggtggctcacagcacggccccttcgcaggcatctcctgtagcaagtccatg
atgaactccatgaacctggtgggcagtcgggctggggtgcccctctatgaccggaaccac
gtcaccggggcctcatccagcagctcgtccagcacgaaggccacgctgtacccgccgatc
ctgaacccgccaccgtcccctgccacggacccttccctgtataacatggatgtgttctgc
tctgcaaacattccgcctgctgccacaccctacaggccctacgtcatccggggcacggtg
cccccaaccacaccctgcagcacggacgtgtgtgacagcgactacagcgccagccgctgg
aagtccagcaagtactacctggacctgaactcggactccgacccctacccgcccccgccc
acgccacacagccagtacctgtcggccgaggacagctgcccgccgtcgcccgccaccgag
aggagctacttccatctcttcccacccccgccttccccctgcacggactcgtcctga
DBGET
integrated database retrieval system
