Ochotona princeps (American pika): 101517092
Help
Entry
101517092 CDS
T07609
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi03250
Viral life cycle - HIV-1
opi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101517092 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101517092 (NUP153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101517092 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101517092 (NUP153)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101517092 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
101517092
NCBI-ProteinID:
XP_004593156
LinkDB
All DBs
Position
12:complement(18312173..18371315)
Genome browser
AA seq
1469 aa
AA seq
DB search
MASGAGGMGGGGGGKIRTRRCQHGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KAEDACSCSADTSGVPQWPENTENDHMIYANEENSNISDGRLTPEPTVSNTEEPSTTGTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHEDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAQSSHSHSLSQHTATNSKKPAFNLSAFG
TLSPSFGNSSVLKTSQLGDSPFYPGKTMYGGAAAAVRQSKQQHTPYQAPVRRQMKAKQLN
AQSYGVTSSTARRILQSLEKMSSPLADAKRIPSVSSFNSPLDRSGLIISDHQAKSQKVDS
QYPPVQRLMTPKPISIATNRNIYFKPSLTMSGELRKTNQRIDKRHSTGCENNMTSGQNEE
RESGFSYPNFGVPAANGLSSAIRGGGGKMRRERTRFAASKPPEEEEMELPVLPKISLPIT
SSSLPVFNFSSPVSTASSLSPISSQTLTNKVQMTSSSNTGNPIFRFSSPIIKSTEADILP
PSSIGFTFSVPIAKTELSGSSNASESIISSSAQDTTAANNSTSCTKRQGEDYEGPFRPAK
TMKEGSVLDLLKNPDFASPKVDCLAAPPTTSPIVYTRPAISSFSSSGSGFGESFKVAASW
QCDTCLLQNKATDNKCIACQAAKSPPRDSVKQTGIGTPSKSDKATLPASGTGFGDKFKPA
VGTWDCDTCLVQNKPEAIKCVACETPKPGTGVRRALTLTAASESAVTGTASSASCTVTSG
SLGFGDKFKRPVGSWECPVCCVTNNAEDNKCVSCMSEKPGSVPASSSSSLPASVTSGSSL
GLEKFKKPEGSWDCAVCLVQNKADSTKCVACKGAKPGTQSEFTGFGTSSASSNSADSPFK
FGIPSSSSSSSGSSQSLTNTGNFKFGDQGGFKTGVSSDSLSGNPLSEGFKFSKPVGGFKF
GVSSDSKPEEVKKDSKNESKFTFGLSSGLSNPASSAPLQFGMSNLGQQEKKEEPPKSSAG
FSFATGVVNSTPTANSLVTSENKSGFSFGSTETKSVSIAPFTCKTPEAKKEEMSTPKGGF
AFGSVEPASLPAVTRYALGMTDDKQQEPVTSTSLVLGKKTDKEEPKCPPVFSFGNSEQTK
DESSKATFSFNMVKSSEKEAEQPGKTTFAFGTQASTTAADQSTAKPVFSFLNNSSSSSVP
ATTTGSGSIFGSLTFSSSQPMSAFVFGQSSNPGSSPAFGSSAEPSTSRSLLFSQDNKPAS
TSSTSTASTSLVFGSGTSSNSAAATSGFAFGATTTSSSAGSSFVFGTAASAPSASPAFGA
TQTPTFGQNPGAAQPAPQGFGSVSSSTALFSAASQPPAFGTVSSSSQLPVFGQQPTQSAF
GSGAAPNSGSVFQFGSSTTNFNFTNNNPTGVFTFGASLSTPAASTQPSGSGGFPFNPTPT
MFTMGSNGKNMFSSAGTGRKIKTAVRRKK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggaatgggagggggcggtggcggcaagatccggacgcggcgt
tgccagcacgggccggtgaagccttaccagcaggggcgaccgcagcatcagggcattctc
agcagggttacggagtctgtgaagaacattgtaccagggtggctgcagaggtacttcaac
aaagctgaggatgcatgcagctgttcagcagacacaagtggggtgccacagtggcccgaa
aatacagagaatgatcatatgatatatgccaacgaggagaactctaacatcagtgatggc
agactcactcctgagccaacagtcagtaatacagaagaaccttcaacaactggtactgct
tcgaattatccagatgtattaacgaggccttctctccatcggagccatctgaatttctcc
gtgttggaatcccccgcgttgcattgtcagccgtctacatcctcagcgttcccaattggc
agttctggattttcccttgtgaaggaaattaaagattctacctcacagcatgaggatgat
aacatctcaactaccagtgggttttcttcaagagcttctgataaagacatagctgtctca
aagaacacttccttgccgcctctgtggtctccagaggctcagagttctcactctcattcc
ctctcccagcacactgccaccaactcaaagaaaccagcattcaacctgtctgcctttgga
acactttccccttcatttgggaattcttcagtccttaaaacaagtcagcttggagattcc
cccttttatcctggaaaaacaatgtatggtggcgcagcagctgctgtaagacagtctaaa
caacagcatacaccgtatcaggctccagtcagaagacagatgaaagccaaacagctgaat
gcgcagtcttacggtgtgaccagttcaacagctcggcgcatattgcagtctctagagaag
atgtcaagcccacttgctgatgcaaaaagaattccatctgtttcttcattcaattctcct
cttgataggagtgggctaattatctcagatcatcaggctaaaagccaaaaggtggactct
cagtatccccctgtgcagagacttatgaccccaaagcccatttctatagcaacaaatcga
aacatttattttaaaccatctctgaccatgtctggtgaactgaggaagactaatcaaaga
atagataaaagacacagtactggatgtgaaaacaacatgacatcaggacaaaatgaagaa
cgggaaagtggcttttcatacccaaattttggtgtgccagcagccaatggcttatcttct
gcaatacgtggtggaggtggcaaaatgcggcgagagaggacacgttttgctgcttctaaa
cctccagaagaggaggagatggaattaccagtattaccgaaaatttctctacctatcacc
agttcgtcactacctgtcttcaatttcagttcccctgtgagcacagcatcctctctgtca
cccatcagttctcagacactgacaaacaaggtacaaatgacctcttccagcaacactggc
aatcccatatttagattttcatctccaatcataaaatctactgaggcagatatactacct
ccatcatctattggatttacatttagtgtgcctattgcaaaaacagaactgtctggttct
agtaatgcttcagaatcaattataagtagttctgctcaagataccactgcagcaaacaac
agtacaagctgtaccaagaggcaaggtgaagattatgagggtccttttagacctgcaaaa
actatgaaggaagggagtgttcttgatcttctgaaaaaccctgattttgcatcaccgaag
gtagattgtcttgctgctccgcctaccacaagcccgatagtttatacaagaccagcaata
agtagcttttcttctagtggtagtggatttggggaaagcttcaaagttgcagcatcatgg
cagtgtgatacatgtctgctccaaaacaaagctacagataacaagtgcatagcctgtcaa
gcagcaaaatcaccaccaagagatagtgtcaaacagactggaattggcacaccaagcaaa
agcgacaaagcaactcttcctgcatcaggaactggctttggagacaaatttaaaccagca
gtaggaacttgggattgtgacacatgtttagtgcagaataaacctgaagcaataaaatgt
gtagcctgtgaaacgccgaaacctgggactggtgtgaggcgcgccctgactttgacagct
gcctcagagagtgccgtgactgggactgcctcgtctgccagctgcaccgtgacctctggt
tccttaggatttggagataaattcaaaaggcctgtggggtcttgggagtgtccagtatgc
tgtgttactaataatgcagaagacaataaatgtgtgtcctgtatgtctgagaaaccagga
agtgtacctgcttcaagtagcagctctcttcctgcatctgtgacttctggaagctctctg
ggattggagaagttcaagaaacctgagggaagctgggactgtgcggtgtgcctagtgcag
aataaagcagactctaccaaatgtgtggcgtgcaaaggggcaaagccgggcacacagtct
gagttcacaggctttggtacatcatctgcatcttcgaactcagcagactcccccttcaaa
tttggtatcccatcatcatcatcttcatcctctggttcttctcaaagtttaacaaacact
ggaaattttaaatttggagatcagggaggattcaaaacaggcgtgtcatctgattctctg
tccggaaaccctttgagtgagggctttaagttttcaaaaccagtgggaggttttaaattt
ggagtttcatccgattctaaacctgaagaagttaaaaaagacagtaagaatgagagtaag
tttacatttggactttcttctgggttaagcaacccagcttcttcagctccattgcaattt
gggatgtctaaccttgggcaacaagaaaagaaagaagaacctcctaaatcatctgcaggc
tttagctttgctacaggtgttgttaactccacaccgactgctaacagcttagtgacctcc
gagaacaagagtggcttcagctttggaagcacagaaaccaagagtgtttccattgctcct
ttcacgtgcaagacgccggaagcaaagaaagaagaaatgtctacccccaaaggagggttt
gcttttggcagtgtggaacctgcctctctgccagctgtcacaaggtatgctttgggaatg
acagacgacaaacagcaagagcctgtcacttctacatctcttgttttggggaagaaaacc
gacaaagaagagccaaagtgtccaccagtgttttcctttggaaattcagagcaaaccaaa
gatgagagttctaaggcaacgtttagctttaatatggtaaagtcatctgagaaggaagca
gaacagccaggaaaaaccacttttgcttttggaacccaagccagtaccacagctgcagat
caaagtacagccaaacctgtttttagtttcttgaacaattcctctagttcaagtgtacca
gccactacaactggtagtggtagcatctttggtagtttaaccttctcctccagtcagccg
atgtcagcctttgtgtttggacagtccagcaaccctgggagcagtcctgcttttggtagc
tctgctgagcccagtacttctcgatctctgctgttttctcaagataacaagccagcttcc
acatccagcacaagtacagcttccacctcactggtctttggttcgggcaccagcagtaac
agtgctgctgcaacctctggctttgcctttggagctacaaccacgtctagctccgcagga
tcctcctttgtatttggtacagcagcttcagcaccatctgccagtccagcatttggtgct
acccagaccccaacatttggacaaaatccaggtgccgcccagcctgctcctcaaggcttt
ggatctgtctcatcgtcaacagcgttattttctgctgcttcccagccacctgcttttggg
acagtgtcaagcagcagccagcttccggtgtttgggcagcagcctactcagtctgcattt
ggctctggagcagctcctaattctggttcggttttccaatttggtagcagcacaacaaat
ttcaactttacgaacaataatccaacaggagttttcacctttggagcaagtttgagtaca
cctgcagcctcaactcagccttcaggctccgggggctttccctttaacccgactccaact
atgtttacaatggggtcaaatgggaaaaatatgttctcatctgctggaactggtcgcaag
ataaagactgctgttagacgaaagaaataa
DBGET
integrated database retrieval system
