Ochotona princeps (American pika): 101517237 Help Entry 101517237         CDS       T07609                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism opi  Ochotona princeps (American pika) Pathway opi03040   Spliceosome Brite KEGG Orthology (KO) [BR:opi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101517237 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:opi03021]     101517237 (SF3B3)    03041 Spliceosome [BR:opi03041]     101517237 (SF3B3)    03036 Chromosome and associated proteins [BR:opi03036]     101517237 (SF3B3) Transcription machinery [BR:opi03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      101517237 (SF3B3) Spliceosome [BR:opi03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     101517237 (SF3B3)  Complex B     101517237 (SF3B3)  Complex C    U2 SnRNP specific factors     101517237 (SF3B3) Chromosome and associated proteins [BR:opi03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      101517237 (SF3B3)     TFTC complex      101517237 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  101517237 NCBI-ProteinID:  XP_004584069 LinkDB All DBs Position 5:complement(41381782..41425330) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG EDWYVLVGVAKDLILNPRSVAGGFVYTYKLINNGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacttgaccttgcagcgagccactggcattagctttgccattcatggc aacttctctggaaccaaacaacaggaaattgttgtttctcgtggcaagatcttggagctg ctgcggccagaccccaacactggcaaagtgcatactcttctcaccgtggaagtgtttggt gtcatccgctcactcatggccttcaggcttacaggaggcaccaaagactacatagtggtt ggcagtgactcagggcggattgttatcttggaataccagccttctaagaatatgtttgaa aaaattcaccaagaaacttttggcaagagtgggtgccggcgcatcgtacctggacagttc ttagctgtggatcccaaggggagagctgttatgattagtgccattgaaaagcagaagttg gtgtacattttgaacagagatgctgcagcccgccttaccatttcatctcccttggaggct cacaaagcaaacacattggtataccatgtggttggagttgatgtgggatttgaaaatcct atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggagaagca gcagctaatacccagcagacactgactttctatgagctagaccttggtttaaatcatgtg gtccgaaagtacagtgaacctttggaggaacatggcaacttccttattacagtcccagga gggtctgatggtccaagtggagtactgatttgctctgaaaactatatcacttacaagaac ttcggtgaccaaccggatatccgatgtccaattcccaggagacggaatgacctggatgac cctgaaagaggaatgatttttgtctgttctgcaacccataagaccaagtcgatgttcttc ttcttggcccaaacagagcagggtgatatcttcaagatcactttggaaacagatgaagat atggttactgagatccggcttaagtattttgatactgtacctgttgctgcagccatgtgt gtgcttaaaacaggctttctttttgtggcatcagaatttggaaaccattatctgtatcaa attgcccatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa gaaggagacacgttcttttttcagccaagaccactgaaaaatcttgtgctggttgatgag ttggatagcctttctcccattctgttctgccagattgctgatctggccaatgaagatact ccacagctgtatgtggcctgtggcaggggaccccgatcatctctaagagtcttaaggcat ggacttgaggtgtcagaaatggctgtttctgaactacccggtaaccccaatgctgtctgg actgtgcgtcggcacattgaagatgagtttgatgcttacatcattgtgtctttcgtgaat gctacccttgtactgtccatcggagagactgtggaagaagtgactgactctgggtttctg ggtaccactccaaccttgtcctgctccttgctaggagatgatgccctggtgcaggtgtat cctgatggcattcggcacatccgagcagacaagcgagtcaatgagtggaagactcctgga aagaagacaattgtgaagtgtgcagtgaaccagcgccaagttgtgattgccttgacagga ggagagctggtctattttgaaatggatccttcaggacagctgaacgagtacacagaacgg aaagagatgtctgcagatgtggtgtgcatgagtctggctaatgtgcctcctggagagcag cggtctcgtttcctggctgtgggattggtggacaacactgtccggattatctccctggac ccctcagactgtttgcagcctctgagtatgcaggctcttccagcccagcctgagtccttg tgtattgtggaaatggggggcactgagaagcaggatgagctgggtgagaggggctctatt ggcttcctgtacctgaatattggattacagaacggtgtgttgctgagaactgtcctggac cctgtcactggagatttgtcggacactcgcactaggtacctgggatcccgtcctgtgaag ctgtttcgtgttcggatgcaaggccaggaagctgtattggccatgtcaagccgttcgtgg ttgagctattcttaccagtctcgcttccatctgactcctctatcctatgagactctggag tttgcatcaggctttgcctctgaacagtgtcctgaggggattgtggccatctctaccaat accctgaggattttggcattggagaagcttggtgctgtcttcaatcaagtagcctttcca ctgcagtacacacccaggaaatttgtcatccatcctgagagtaacaaccttatcatcatt gagacagaccacaatgcctacactgaggccaccaaggctcagaggaagcaacagatggcc gaggaaatggtggaagcagcaggggaggatgagcgagaattggctgcagagatggcagca gccttcctcaatgaaaacctgccggaatccatttttggagctccgaaagctggcaatggg caatgggcatctgtgatccgggtgatgaatcctattcagggcaatacccttgaccttgtc caactggaacaaaatgaggcagccttcagtgtggctgtgtgcagattctcaaacactggt gaagactggtatgtgctggtgggtgtggccaaggacctgatcctgaatccccgctctgtg gcgggaggctttgtctatacttacaagcttattaacaatggggaaaagttggaattcttg cataagactccagtggaagaagtccctgctgccattgccccgttccagggaagagtgttg attggcgtggggaagcttttgcgtgtctatgacctggggaagaagaaattactccgaaag tgtgagaataagcatattgccaactatatatctgggattcagactattgggcacagagtc attgtgtctgatgtccaagaaagtttcatctgggtgcgctacaaacgtaatgagaaccag ctcattatcttcgctgatgacacctatccccgatgggtcaccactgctagcctcctggac tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgagactcccacca aacactaatgatgaagtggacgaggatcccacgggaaacaaggccctgtgggaccggggc ctgctcaatggggcctcacagaaggcagaggtaatcatgaactatcatgttggggagaca gtgctatcattacagaagaccacactgattcctggcggctcagaatctcttgtctatacc accttatctggtgggattggcatcctggttccattcacatcccatgaggatcatgacttc ttccagcatgtggaaatgcacctgcggtctgagcacccccctctctgtggacgggaccac ctcagctttcgttcctattacttccctgtaaagaatgtgattgatggagacctctgtgaa cagttcaattccatggaacccaacaagcaaaagaatgtttctgaggagcttgaccgaact ccacctgaagtgtccaagaagcttgaggacatccggacccgttatgccttctga

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