Ochotona princeps (American pika): 101517271
Help
Entry
101517271 CDS
T07609
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04010
MAPK signaling pathway
opi04020
Calcium signaling pathway
opi04713
Circadian entrainment
opi04925
Aldosterone synthesis and secretion
opi04927
Cortisol synthesis and secretion
opi04929
GnRH secretion
opi04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101517271 (CACNA1H)
04020 Calcium signaling pathway
101517271 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101517271 (CACNA1H)
04925 Aldosterone synthesis and secretion
101517271 (CACNA1H)
04927 Cortisol synthesis and secretion
101517271 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
101517271 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101517271 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101517271 (CACNA1H)
Ion channels [BR:
opi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101517271 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101517271
NCBI-ProteinID:
XP_036354173
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
LARTWFEHVSMLVILLNCVTLGMFRPCEDLDCRSERCRILEAFDDFIFAFFAVEMAVKMV
ALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSM
RILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLSFLR
PYYQTEEGEEHPFICSSRRDNGMQKCSHIPGRRELRVPCTLGWEAYGQPQAEATGGGHGA
CINWNQYYNVCRSGDTNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNF
IYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSC
YEELLRYLGHVCRKVRRRGLRLYARWQSRWHTQTEPSSAPAGQGPRRAGRRAASVHHLVY
HHHHHHHHHYHFSHGSPRRPGPETGTADSRLVRASSPPSPGRGPPDAESVHSIYHADCHV
EGPQDRARVAHAAAAAAAGLKLASGLRAMNYPTILPSGLGGSKGSSSPRPSGKQAHSPLS
LGSPGPYERIQHVVGEHGLGRAPGRLSGLSVPCPLPGPQAGTLTCELKDCPHCARAREDA
GSESGDSDIHGVYEFTQDLRHGDHRDPMQSPAAAEATPLKAAPGAPLGGLGRLWAALSGK
LRRIVDSKYFSRGVMVAILVNTLSMGVEYHEQPEELTNALEISNVVFTSVFALEMLLKLL
ACGPLGYVRSPYNIFDGVIVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQL
VVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWAIV
TVFQILTQEDWNVVLYNGMASTSSWAALYFVTLMTFGNYVLFNLLVAILVEGFQAEGDAN
RSDTDEDKTSTRFEEDFNKFKDLQTTEMKLCSLAVTPNGHLEGRSGLLPPLILRTAATPS
PKGSPQLDTTRDLPDSRRGSSCSVDPQLGDQRSLTSLRGSPCTHWGPSSTWSSRRSSRSS
LKRRGQHGERESLLSGEGKGSTDDEEAEAGRPGGAGTMPGPHSPTLRRTESLDPRSLRPP
PNLLPAKLRDCNGQTLALPSEIFLRIDSHREDPAELDEDVEDSCCFRLRKVLEPYRPQWC
RSRESWALYLFSPQNRLRVCCQRIVAHRLFDHVVLAFIFLNCITIALERPDIDPGSTERV
FLSVSNYVFTAIFLAEMMVKVVARGLLAGEHAYLQSSWNLLDGLLVLVSLVDIIVAMASA
SGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGI
LGVQLFKGKFYYCDGADTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGW
VNIMYDGLDAVGVDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQE
AEEARRREEKRRRHLEKQRRSTFPSPEAQRRPYYADYSHTRRSVHALCTSHYLDLFITFI
IGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDL
AIVLLSIMGIALEEIETSAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQAL
PQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFGMAFLTLFRVST
GDNWNGIMKDTLRECAREDRHCLSYLPALSPVYFVTFVLVAQFVLVNVVVAVLMKHLEES
NREAHENGDVDDTEPDTPPAPTGSAGPGPDTSNVLVARKVCVSRMLSLPNDSYMFRPVTP
VSVPQQRLQEVEMAAYTGGASPGPAATSLSLPSEPCVPLCAPTPRPVLCTPSPGPPLYTQ
EAVPMEPLEGQAEDPGDSTPDPGEPVEKTSAQQACLRSPPCSPRPAGIRPRKQASGQCIC
SCPPGPSTEEAETSDLADQEVSNITSSARPWVAASPVAPRAAPGGQALRRFHSLGAPGLL
DKPSQAEGQRWPSAELGSNTGRPEPGEGRAWVPEAEPGLGARRKKKMSPPCISIDPPAEE
EGAARPPATEGGSGSGLRRRTPSCEAAPHRDCLEPTTTTSEGPGTGGDPMAKGERRGRPE
HLTVPSFAFESLDTAADSGCSEMPGATVPPEPHGTDPPGVPGDPPEPAWGLHLVVPPTDG
AGKPT
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
ctcgcccgcacgtggttcgagcatgtcagcatgctggtcatcctgctcaactgcgtgacc
ctgggcatgttccggccctgtgaggacctggactgccgctccgagcgctgccgcatcctg
gaggccttcgacgacttcatctttgccttcttcgcggtggagatggccgtcaagatggtc
gccctgggactgttcggccagaagtgctacctgggtgacacttggaaccggctggacttc
ttcattgtcatggcaggcatgatggagtactccctggacggacacaacgtgagcctctcg
gccatccgcaccgtgcgcgtgctgaggccgctgcgcgccatcaaccgtgtgcccagcatg
cggatcctggtcacgctgctgctggacacgctgcccatgctcggcaacgtgctgttgctg
tgcttcttcgtcttcttcatttttggcattgtgggtgtccagctctgggctggcctgctc
cgtaaccggtgcttcctggacagcgccttcgtgagaaacaacaacctgagcttcctgcgg
ccctactaccagacggaggagggcgaggagcaccccttcatctgctcctcacgccgtgat
aacggcatgcagaagtgctcacacatccccggccgccgcgagctgcgtgtgccctgcacg
ctgggctgggaggcgtacggtcagccgcaggccgaggccacaggcggcggccacggcgcc
tgcatcaactggaaccagtactacaacgtgtgccgctctggtgacacaaacccgcacaac
ggggccatcaacttcgacaacatcggctacgcctggatcgccatcttccaggttatcaca
ctggagggctgggtggacatcatgtactacgtaatggatgcccactcattctacaacttc
atctacttcatcctgctcatcattgtgggctccttcttcatgatcaacctgtgcctggtg
gtcatcgccactcagttctccgagacgaagcagcgggagaaccagctgatgcgggaacag
cgggcccgctacttgtccaacgacagcacgctggccagcttctcggagccaggcagctgc
tacgaggagctgctcaggtacctgggccacgtgtgccgcaaggtccggcgccgtggcctg
cgcctctacgcccgctggcagagccgctggcacacgcagacagagcccagcagtgccccg
gccggccagggcccacgccgggcaggccggcgggcggcctctgtgcaccacttggtctac
caccaccaccaccaccaccaccatcactatcacttcagtcatggcagccctcgccggccg
ggccctgagacgggcactgctgactctaggctggtgcgggccagctccccaccctcgccg
ggccgcgggcccccagacgccgagtccgtgcacagcatctaccatgccgactgccacgtg
gaagggccgcaagacagggcccgagtggcccatgctgcagctgcggccgctgctggcctc
aagctggcctcagggttgcgggccatgaactaccccacgatcctgccctctgggcttggc
ggcagcaagggcagcagcagcccccggccctcgggaaagcaagcacacagccccctgagc
ctgggcagtcctggcccctacgagcgaatccagcacgtggtgggcgaacacggactaggc
agggcccctggccgcctgtcaggcttgagtgtgccctgcccgctgcctggtccccaagcg
ggcacgctgacctgtgagctgaaggactgcccacactgcgcccgtgcccgggaagacgct
gggtctgagagtggcgactcagacatccatggggtctatgagttcacgcaggacctgcga
cacggtgaccatcgggatcctatgcagtcacctgctgccgctgaggccactccgctgaag
gcagccccgggggcaccgctcggtgggctgggccggctgtgggctgctctcagcgggaaa
ctgcgacgcattgtggacagcaagtacttcagccgtggcgtcatggtggccatcctggtg
aacacgctgagcatgggcgtggagtaccatgagcagcccgaggagctgaccaacgccttg
gagatcagcaacgtggtgtttaccagcgtgttcgccctggagatgctgcttaagctgctg
gcctgtggcccgctgggctacgtccgcagcccctacaacatcttcgacggagtcatcgtg
gtcatcagcgtgtgggagatcgtggggcaggcggacggcgggctgtcggtgctgcggacc
ttccggctgctgcgagtgttgaagctggtgcgtttcctgccggcgctgcggcggcagctc
gtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctcttt
atcttcatcttcagcatcctgggaatgcacctgttcggatgtaagttcagcctcaaaacg
gacagtggtgacacggtccctgacaggaagaacttcgactccctgctgtgggccatcgtc
actgtgttccagatcctcacccaggaggactggaacgtcgtcctctacaacggcatggcc
tccacctcctcctgggccgccctctacttcgtgaccctcatgaccttcggcaactacgtg
ctcttcaacctgctggtggccatcctggtggagggcttccaggcggagggtgatgccaac
aggtcagacacggacgaggacaagacctccacccgctttgaagaggatttcaacaagttc
aaagaccttcagaccacagagatgaagctgtgctcgctggctgtgacccccaacggacac
ctggagggccgcagtggcctgctgcccccactgatcctacgcacagcagccacaccctcc
cccaagggctccccacagctggacaccacccgtgacctccctgattctcggcgcggcagc
agctgctctgtggatccccagctgggcgaccagcggtctctgaccagcctccgcggctcg
ccctgcacccactggggccccagcagcacttggagcagccggcggtcaagccggagcagc
ctcaagcggcgtggccagcacggggagcgggagtcgctgctgtccggcgagggcaagggc
agcaccgacgacgaggaggccgaggctggccggcctgggggtgcggggaccatgccgggc
cctcacagccccactctgcgccgcaccgagtccttggacccgcggagcctgcgcccccca
cccaacctcctgcccgccaagctccgtgactgcaacggacagacactggccctgcccagc
gagatcttcctgcgcatcgatagccacagggaggacccggctgagctggacgaggacgtg
gaggacagctgctgcttccggctgcgcaaggtgctggagccctaccggccccagtggtgt
cgcagccgcgagtcctgggctctctacctcttctccccgcagaaccggctccgtgtctgc
tgccagaggatcgtggcgcacaggctgtttgaccacgtggtgctggctttcatcttcctc
aactgcatcaccattgccctggagaggccggacatcgacccaggcagcactgagcgtgtc
ttcctcagcgtctccaattacgtcttcacagccatcttcctggctgaaatgatggtgaag
gtggtggcgcggggcctgctggccggcgagcacgcctacctgcagagcagctggaacctg
ctggacgggctgctggtcctggtatcgctcgtcgacattatcgtggccatggcctcagcc
agcggtgccaagatcctgggcatcttgcgtgtgctgcgcctgctgcggaccctgcggcca
ctgagggtcatcagccgggccccaggcctcaagctggtggtggagacgctcatctcctcc
ctgaggcccatcgggaacatcgtgctcatctgctgcgccttcttcatcatcttcggcatc
ctcggggtgcagctcttcaagggcaagttctactactgtgacggtgctgacacaaggaat
atctccaccaaggccgagtgccgggctgcccactaccgctgggtgcggcgcaagtacaac
ttcgacaacctgggtcaggcgctgatgtcgttgtttgtgctgtcgtccaaagacggctgg
gtgaacatcatgtatgacggactggatgctgtgggagtggaccagcagcccgtgcagaac
cacaacccctggatgctgctgtacttcatctccttcctgctcatcgtcagcttcttcgtg
ctcaacatgtttgtgggcgtggtggtggagaacttccacaagtgccggcagcaccaggag
gccgaggaggcgcgccggcgcgaggagaagcggcggcgacacctggagaagcagcgcagg
agcaccttccccagcccagaggcccagcgccggccctactatgctgactactcgcacacc
cggcgctccgtgcatgcactgtgcaccagccactacctggacctcttcatcacctttatc
atcggcgtcaatgtcatcaccatgtccatggagcactacaaccagcccaagtcactggac
gaggccctcaagtactgcaactacgtcttcaccatcgtcttcgtcttcgaggctgtgctg
aagttggtggcttttgggttccggaggttcttcaaggacaggtggaaccagctagacctg
gcaatcgtgctgctgtccatcatgggcatcgcgctggaggagattgagacaagtgctgcc
ctgcccatcaatcccaccatcatccgcatcatgcgtgtcctgcgcattgcccgcgtgctg
aagcttctgaagatggccacgggcatgcgggccctgctggacacagtggtgcaagccctg
ccccaggtgggcaacctgggcctcctcttcatgctcctgttcttcatctacgcggctctg
ggcgtggagctgtttgggaggctagagtgcagcgaggacaacccatgtgagggcctgagc
aggcacgccactttcaccaacttcggcatggccttccttacgttgtttcgcgtatccacg
ggcgacaactggaatgggatcatgaaggacacgctgcgtgagtgcgcacgggaggaccgg
cactgcctcagctacctgcctgcactctctcctgtctactttgtgacctttgtgctggtg
gcccaatttgtcctggttaacgtggtggtggccgtgctcatgaagcacctggaggagagc
aaccgtgaggctcatgagaatggtgatgtggacgacaccgagcccgacacgccgccagcg
cccactggaagtgcagggcccgggccggacacctccaatgtgctagtggcacgcaaggtg
tgcgtgtctcggatgctgtcgctgcccaacgacagctacatgttccggcctgtgactcct
gtctcagtcccacagcagcgcctgcaggaagtggagatggccgcctacacaggtggcgcc
tcgccaggtcccgctgcaacctcgctgtcactgccctcggagccctgtgtccccctctgt
gccccgaccccgcggcccgtgctctgcactcccagcccaggcccgccactctacacacag
gaggccgtgcccatggagcccttggaggggcaggccgaggaccctggggacagcacccca
gaccctggggaacctgtggagaagacgtctgcccagcaagcatgcctgcggtccccaccc
tgctccccacggccagccggcatccgtccccgcaagcaggcttcaggacagtgcatctgc
agctgcccgccaggccccagcaccgaggaggctgagacctcagacctggctgaccaggag
gtcagcaacatcaccagctctgcccggccctgggttgcagcctccccggtggcccctagg
gcagcgcctggcgggcaggccctgcgcagattccacagcctcggtgccccgggcctcctg
gacaagcccagccaggcggaagggcagcggtggccatcggcagagctgggtagcaacact
ggccgcccggagccgggggagggccgggcctgggtcccagaggcagagccgggcctgggg
gctcgccggaagaagaagatgagccctccctgcatctctatagaccccccggccgaagag
gagggtgctgcccggcccccggccacagagggtggcagtggcagtggcctacggcgcagg
accccatcctgtgaggctgccccccacagggactgcctggagcccaccaccacaaccagt
gagggcccaggcacgggcggggaccccatggccaagggagagcggcggggccggcccgag
cacctgactgtccccagctttgcctttgagtcgctggacacagcagcagatagtggttgt
agcgagatgccaggggccacggtgcctccagagccccatgggacagacccacctggggtg
cctggtgacccccctgagccggcctgggggctgcaccttgtggtgcccccaactgacggt
gcaggcaagcccacgtag
DBGET
integrated database retrieval system
