Ochotona princeps (American pika): 101517342
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Entry
101517342 CDS
T07609
Symbol
USP53
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
opi03037
]
101517342 (USP53)
Cilium and associated proteins [BR:
opi03037
]
Other cilia and associated proteins
Stereociliary proteins
101517342 (USP53)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101517342
NCBI-ProteinID:
XP_004594619
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All DBs
Position
15:complement(32079190..32122878)
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AA seq
1105 aa
AA seq
DB search
MAWVKFLRKPAGNLGKAYQPGSMLSLAPTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSL
RVLTGHVCQGDACIFCALKTIFAQFQHSREKALPSDNIRHALAESFKDEQRFQLGLMDDA
AECFENILERIHFHIVPSRDADMCTSKSCITHQKFAMTLYEQCVCRSCGASSDPLPFTEF
VRYISTTALCNEVERMMERNERFKPEMFAELLQAANTTDDYRKCPSNCGQKIKIRRVLMN
CPEIVTIGLVWDSEHSDLTEDVVRNLTTHLYLPGLFYRVTDENAKNSELHLVGMICYTSR
HYCAFAFHTKSSKWVFFDDANVKEVGAKWKDVVSKCIRCHFQPLLLFYANPEGTAVSTED
ALRQVVNWSHYKSGAENMGHEKPTFYKPDNSRENEFGDQVKQRENQKFQTDNISLFTRNH
IQTSGGRGPVKLTHNDQREKMKDISRECALKAIEQKNALSSQRRDLEKGQRRDVGRHKDL
VDEDLSHFKAGSPQTPNDFRQIGNPHLYQSQGKGPYKQERVAHQGRSSAQGSSSKSQIPA
AGEKVAGKAKSDSGTGYETDSSQDSRDKGSSCNSSSKNRNRGWKPMRETLNVDSIFSESE
KKQHSPRHKSNISNKPKCSKEQNFNNWPKENPKQRGLMTIYEDEMKQEIGSRSSLESNGK
GMEKNRGLPESKVHGDAWQVQRAESGYESSDHISNGSMNLDSPVVDGNGTTIESSGVKET
VTFSDQSKMSSSNSEHLNCNSHQSKSHLEGFRKELKNLEAGCKSPEFNSESHPQIKSHLI
KRPHILDPSGKLLSSSSAQVLKDHTVRELFHQSDGQKLEKPEDGKFSEWRNPENSERTDI
PFPGDGNSTSGKKMNNNEIPSPSSLWLSHTRTVGLKPETTPSTHQQSMMQQGYSENSLSR
EHVTKSTCRADGCQLPKLYQNSPPPLPPKKYAVTSVPQSEKNDSTPDVKLAEMLKANSSS
LPKHNLCTAPEARVEVNTYMNDGSCKETFQVKEQVGNTPNYSGNPTKDFQSNRGTIVDGF
CQPSSACPNEKIALTTYFSVDSCMTDTYRLRYHQRPKLCFPGISDFYDENSLSESERGLG
PMLHTSLGSNCSSEQRCKPTLHCNR
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggtgaaatttttacggaaacctgctggcaatcttggaaaagcttatcagcca
gggagtatgctatccctagccccaaccaaaggcttgttaaatgaaccaggacaaaatagc
tgctttcttaatagtgctgtacaggttttatggcagttggacatattccgacgaagtttg
cgagttctgactggacatgtttgtcaaggagatgcctgcatattctgtgcattgaagaca
atatttgcacagtttcagcacagccgagaaaaagcactcccatcagacaacatcaggcac
gctctcgcagaaagcttcaaagatgagcagcgattccagcttggccttatggatgatgct
gcagagtgctttgaaaacatactggagaggattcatttccacatcgtgccaagcagggac
gcagacatgtgcacctccaagtcctgtatcacccatcagaagttcgccatgactctgtat
gagcagtgtgtgtgtcgtagctgtggagcatcatctgaccctctaccttttacagaattt
gtgcggtacatttctacaacagccctatgcaatgaagttgaaagaatgatggaaagaaat
gaacgctttaaacctgaaatgtttgcagaattgctgcaagcagcaaatacaacagatgac
tataggaaatgtcctagcaactgtggccaaaaaataaaaattcgtcgtgttttaatgaat
tgtccagagattgttacaattggattagtctgggattctgagcattcagacttgactgaa
gatgttgttcggaatctgacaacacatctttatcttcctgggcttttttatagggtaact
gatgaaaatgccaaaaacagtgaacttcacctggttggtatgatctgctacaccagccga
cattattgtgcctttgcttttcatacgaagagttctaaatgggtgttttttgatgatgcc
aatgtaaaagaggttggagctaaatggaaagatgtggtctccaagtgcattcgttgccac
tttcagccactgcttttgttttatgcaaacccagaaggcacagcagtttctacagaagat
gcacttaggcaggtggtcaactggtcacattacaaatctggtgcagaaaatatgggacat
gaaaagcctacattttataagcctgataattcaagagaaaatgaatttggtgatcaggta
aaacagagagaaaaccagaaatttcaaactgataatatttcattgtttactcgaaaccac
attcagacaagtggagggagagggccggtaaagttaactcacaatgatcaaagggaaaag
atgaaagacatttccagagaatgtgccctgaaagccattgaacagaaaaatgcactttcc
tctcaaaggagagacttagagaaggggcaaagaagagatgtaggccgacataaagatttg
gttgatgaggatctgtcccatttcaaagccgggtctccccaaaccccaaatgactttcga
cagattgggaatccacacctgtatcagagtcaaggaaaaggaccctataagcaggagcgg
gttgcgcatcagggtcgatcctctgcacagggaagttcaagcaaatcccagattcctgct
gcaggagagaaagtggctggcaaagcgaagagtgacagcggcactggctatgagacagac
agcagccaggattccagggataaaggaagcagctgtaacagcagcagtaagaaccggaac
cgcggttggaaacctatgagagaaacgttaaatgtggacagcattttcagtgaaagtgaa
aaaaagcagcacagtccaagacataaatcaaatatcagtaacaagcctaaatgtagcaaa
gaacagaattttaataattggccaaaggagaatccaaaacagagaggcttaatgaccatt
tatgaagatgaaatgaagcaggaaatcggaagcagaagttcccttgaatcaaatggaaaa
ggaatggagaaaaaccgaggcctccccgagagtaaagttcacggcgacgcttggcaggtg
caaagggctgagtctgggtatgagagcagtgaccacatcagtaatggatccatgaacttg
gactcacctgtcgttgacggaaatggtaccacaatagagagcagtggtgttaaagaaaca
gtaaccttcagtgatcagagtaagatgagcagctcaaattcagaacacctgaactgtaac
tcccatcagagtaaaagtcacttagaaggttttagaaaagaactcaagaacttggaagca
ggttgtaaatctcctgagttcaactcggaatcacacccacaaataaaaagtcatttgata
aaaaggccacatatccttgaccccagtggaaagctgctttcttcatccagtgcacaagta
ctcaaggatcatactgttagagagctcttccaccagtcagacggacagaagctggaaaag
cctgaggatggaaagttttctgagtggcgtaatccagaaaattctgagagaacagatatt
ccttttcctggtgacggtaactccacttctgggaagaaaatgaacaataatgagatacca
tcaccgtcttcattgtggttatcacacacaagaactgttgggttaaaaccagaaaccact
ccttccacccatcagcaaagtatgatgcagcaaggttactctgaaaattctctgtcaagg
gaacatgtaactaagtcaacctgcagagctgatggttgtcagttgccaaaactttaccag
aattcaccaccccctttgccaccaaagaaatatgctgtaaccagtgtgccacagtcagag
aaaaacgactctacacctgatgttaaacttgcagaaatgcttaaagctaattcttctagt
cttccgaagcacaatttatgtacagctccagaagcaagggtggaagtaaatacatatatg
aatgatggaagctgtaaagaaacattccaagtgaaagagcaagttggcaacacaccaaac
tactcgggcaacccaactaaagattttcagtcaaacagagggacaattgttgatggattt
tgccaacccagttctgcatgtccaaatgagaaaattgcattaaccacgtatttttccgtt
gatagctgcatgactgacacatacaggttgaggtatcatcagaggcccaagctctgcttt
ccagggatcagtgacttctatgatgagaattcactgtctgagagtgaaagagggttggga
cccatgttacatactagtcttggttcaaactgttcttctgagcaaagatgtaaacctact
ctacactgtaacagataa
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