Ochotona princeps (American pika): 101517469
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Entry
101517469 CDS
T07609
Symbol
HOXA1
Name
(RefSeq) homeobox protein Hox-A1 isoform X1
KO
K09301
homeobox protein HoxA/B/D1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101517469 (HOXA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101517469 (HOXA1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
101517469 (HOXA1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
PHC2_SAM_assoc
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
101517469
NCBI-ProteinID:
XP_004582483
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Position
10:complement(15707165..15708765)
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AA seq
341 aa
AA seq
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MDNARMSSFLEYPILSSGDSGTCSARTYSSDHGITTFQSCAVSANNCSGDDRFLVGRGVQ
ISSPHHHHHHHHHHHHHPQPATYQASGNLGVSYSHSGCGPSYSAQNFGAPYSPYGLNQEA
DVSGGYPSCAPAVYSGNLSSPMVQHHHHHHHHQGYAGGTVGSPQYIHHSYGQEHQSLTLT
TYNNPLSPLHASHQETCRSPASETSSPAQTFDWMKVKRNPPKTGKVGEFGYVGQPNAVRT
NFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLP
ISPATPPGSEEKAEESSEKSSPSPCIPSPGSSTSDTLPTSH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcaaggatgagctccttcctggaataccccatccttagcagtggcgactcc
gggacctgctcagcgcgaacctactcctcggaccatgggattacaactttccagtcgtgc
gcagtcagtgccaacaactgcagcggtgacgatcgctttctagtgggcaggggggtgcag
atcagctcgccccaccaccaccaccatcaccaccaccaccaccatcatcaccctcagccg
gccacttatcaggcttctggaaatctgggggtgtcttactcccactcaggttgtggtcca
agctatagtgcgcagaactttggtgcgccttacagtccctatgggttaaaccaagaagca
gacgtaagtggtgggtacccctcgtgcgctcctgctgtgtactctggaaacctctcatct
cccatggtccagcatcaccaccaccaccaccaccaccagggttatgccgggggcacggtg
ggctcgcctcagtacattcaccactcatacggacaagagcaccagagcctgaccctgacc
acgtataataaccctctgtcccctctccacgccagccaccaagaaacctgccgctcccct
gcctcggaaacgtcttctccggcacagacctttgactggatgaaagtaaaaagaaatcct
cccaaaacagggaaagtcggagagttcggctacgtgggtcagcccaacgccgtgcgcacc
aacttcaccactaagcagctcacggagctggagaaggagttccacttcaacaagtacctg
acacgggctcgcagggtggagatcgctgcatctctgcagctcaacgagacgcaggtcaag
atctggttccagaaccgacgcatgaagcagaagaaacgggagaaagaggggctgctgccc
atctctccagccacccctcccggaagcgaggagaaggctgaggaatcctctgagaagtcc
agcccctcaccctgcatcccttcgccggggtcctctacctctgacaccctacctacctct
cattga
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